PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

HL.SW.v1.0.G006766.1

Organism

Humulus lupulus

Taxonomic ID

3486

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus

Family

bZIP

Protein Properties

Length: 333aa MW: 36418.2 Da PI: 6.4102

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
HL.SW.v1.0.G006766.1	genome	HOPBASE	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	33.2	1.1e-10	200	243	5	48
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 kr +r NR +A+rsR RK+++i eLe+ v +L+ae + L + HL.SW.v1.0.G006766.1 200 KRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPR 243 8999********************************98877655 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	8.2E-14	196	260	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.622	198	250	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	4.2E-13	200	251	No hit	No description
Pfam	PF00170	9.8E-9	200	244	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	4.5E-11	200	254	No hit	No description
CDD	cd14703	4.82E-22	201	251	No hit	No description
PROSITE pattern	PS00036	0	203	218	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0045893	Biological Process	positive regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 333 aa Download sequence Send to blast
MAQLPPKIPN MTLPNWPDVV SHGKLPSLAT NPSWVDEFLD FSTARRGSHR RSVSDSITFL 60 ETPMLDECRG GGGGGSGAAP PQGRATLPGS GGGGGSGGNN NDHGEFDRFD DEQFMSMFND 120 EMASMAVAGP NVSSSNPSTP SDHNSINDEK EMQLDRSSSK QQQVKNESEE VDSQCNSDSQ 180 PNPTGTTTTN AANDRVIDPK RVKRILANRQ SAQRSRVRKL QYISELERSV TSLQAEVSVL 240 SPRVAFLDHQ RLLLNVDNSA LKQRIAALAQ DKIFKDAHQE ALKREIERLR QVYHQQNMKK 300 MENNVGQSQS SMGDTTKSPI DKNDQQLLNV SS*

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator. {ECO:0000269\|PubMed:17719007}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_006469052.1	1e-150	basic leucine zipper 61
Swissprot	Q9M2K4	1e-118	BZP61_ARATH; Basic leucine zipper 61
TrEMBL	A0A2P5E7U2	1e-167	A0A2P5E7U2_TREOI; Basic-leucine zipper transcription factor
STRING	XP_006469052.1	1e-149	(Citrus sinensis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF2011	34	88

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G58120.1	1e-104	bZIP family protein

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Gibalová A, et al. Characterization of pollen-expressed bZIP protein interactions and the role of ATbZIP18 in the male gametophyte. Plant Reprod, 2017. 30(1): p. 1-17 [PMID:27896439] Ezer D, et al. The G-Box Transcriptional Regulatory Code in Arabidopsis. Plant Physiol., 2017. 175(2): p. 628-640 [PMID:28864470]