PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID HL.SW.v1.0.G013174.1
Organism
Humulus lupulus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus
Family FAR1
Protein Properties Length: 111aa    MW: 13021.9 Da    PI: 8.8371
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
HL.SW.v1.0.G013174.1genomeHOPBASEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR142.81.7e-1347110266
                  FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkakl 66 
                           fY+ Y k vGFsvr++ +k++  +g+i  r++vCs+eg+r+e   +  ++++r++  tr+gC+a++
  HL.SW.v1.0.G013174.1  47 FYKPYTKWVGFSVRIDDTKYR--DGSISIRRWVCSNEGFRREIFMNlPNRKKRPKDITRCGCQAEI 110
                           9***************98887..999****************98887889999**********986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031018.1E-1147110IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 111 aa     Download sequence    Send to blast
MTDIDLSSNP HWEEILSSLQ LYKRVAEKDT NDILGKEMNT LDKLEAFYKP YTKWVGFSVR  60
IDDTKYRDGS ISIRRWVCSN EGFRREIFMN LPNRKKRPKD ITRCGCQAEI *
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1594747
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07500.12e-09FAR1 family protein