PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID HL.SW.v1.0.G014778.1
Organism
Humulus lupulus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus
Family EIL
Protein Properties Length: 669aa    MW: 75057.9 Da    PI: 6.3886
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
HL.SW.v1.0.G014778.1genomeHOPBASEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3429.92.4e-131333561303
                           XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
                  EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasd 89 
                           eel++rmwkd+++lkrlker+k    +++ a++++k +++++qarrkkmsraQDgiLkYMlk mevc+a+GfvYgiipekgkpv+gasd
  HL.SW.v1.0.G014778.1  33 EELERRMWKDRIKLKRLKERQKLA--AQQ-AAEKQKPKQTSDQARRKKMSRAQDGILKYMLKLMEVCKARGFVYGIIPEKGKPVSGASD 118
                           8*******************9963..344.599******************************************************** PP

                           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S-- CS
                  EIN3  90 sLraWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGke 178
                           ++raWWkekv+fd+ngpaai+ky+a++l+l +++++  ++ ++++ l++lqD+tlgSLLs+lmqhc+ppqr+fplek v+pPWWPtG+e
  HL.SW.v1.0.G014778.1 119 NIRAWWKEKVKFDKNGPAAIAKYEAECLALCEADNN--QNGNSQSILQDLQDATLGSLLSSLMQHCEPPQRKFPLEKKVPPPWWPTGNE 205
                           *******************************99999..5699999******************************************** PP

                           HHHHHHT--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXX.. CS
                  EIN3 179 lwwgelglskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahss.. 265
                           +ww +lgl++ q  ppykkphdlkk+wkv+vLtavikhmsp+i++ir+++rqsk+lqdkm+akes+++l vl++ee+++++ s+++   
  HL.SW.v1.0.G014778.1 206 DWWVKLGLPTGQT-PPYKKPHDLKKMWKVGVLTAVIKHMSPDIAKIRRHVRQSKCLQDKMTAKESAVWLGVLSREEALVRQPSSDNGts 293
                           *********9998.***********************************************************************4445 PP

                           .....XXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXX....................X CS
                  EIN3 266 .....slrkqspkvtlsceqkedvegkkeskikhvqavktta....................g 303
                                  r+++++  +++++++dv+g ++   + ++ + +++                    +
  HL.SW.v1.0.G014778.1 294 gvteiPPRRGEKDAAANSDSNYDVDGADDGLGSVSSRDPRRSqsmgversgnlqnntsqpgqD 356
                           788887788999*************88777755444433333445555555555544444440 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048738.0E-12633280No hitNo description
Gene3DG3DSA:1.10.3180.101.1E-70154288IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167682.09E-61161284IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0042762Biological Processregulation of sulfur metabolic process
GO:0071281Biological Processcellular response to iron ion
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 669 aa     Download sequence    Send to blast
MAYEGDSSDI EVEDLRCDDL ADKDVSDEEI EPEELERRMW KDRIKLKRLK ERQKLAAQQA  60
AEKQKPKQTS DQARRKKMSR AQDGILKYML KLMEVCKARG FVYGIIPEKG KPVSGASDNI  120
RAWWKEKVKF DKNGPAAIAK YEAECLALCE ADNNQNGNSQ SILQDLQDAT LGSLLSSLMQ  180
HCEPPQRKFP LEKKVPPPWW PTGNEDWWVK LGLPTGQTPP YKKPHDLKKM WKVGVLTAVI  240
KHMSPDIAKI RRHVRQSKCL QDKMTAKESA VWLGVLSREE ALVRQPSSDN GTSGVTEIPP  300
RRGEKDAAAN SDSNYDVDGA DDGLGSVSSR DPRRSQSMGV ERSGNLQNNT SQPGQDKEQL  360
DKPPKRPRLN SKPTDQLPRP SQNEHLHIKP RNNLPDINHT EEPPKRPRLN SKPTDQLPQP  420
SQNEHLHIEP RNSLPDINHT EEVHLIGYHS EQNQQEDETV TGLRPPDKDM DVESQLPVSD  480
FNSLFALPSD NEVSTHSRHE GGAAMHFHEI PNTGIHHGDT YNFYNPSANY GPSHDRHHSP  540
VAINEIHVRP ADGVHLPTVH RNGSEISGGD LPYYVNNEQD RPVDSHFGSP LNSLSLDFGG  600
FNSPLNFGIN GTSVLDDLLL DDDLIQVVRY RLIVDWGSLH QSIIELISSP SICDYGSIRK  660
TNSIVGIM*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wij_A2e-721602919140ETHYLENE-INSENSITIVE3-like 3 protein
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may be involved in the ethylene response pathway. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00233DAPTransfer from AT1G73730Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010091992.10.0ETHYLENE INSENSITIVE 3-like 3 protein
SwissprotO231160.0EIL3_ARATH; ETHYLENE INSENSITIVE 3-like 3 protein
TrEMBLA0A2P5D8V80.0A0A2P5D8V8_PARAD; Ethylene insensitive 3-like protein, DNA-binding domain containing protein
STRINGXP_010091992.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF32234200
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73730.11e-172ETHYLENE-INSENSITIVE3-like 3
Publications ? help Back to Top
  1. Frerigmann H,Gigolashvili T
    Update on the role of R2R3-MYBs in the regulation of glucosinolates upon sulfur deficiency.
    Front Plant Sci, 2014. 5: p. 626
    [PMID:25426131]
  2. Zheng ZL,Zhang B,Leustek T
    Transceptors at the boundary of nutrient transporters and receptors: a new role for Arabidopsis SULTR1;2 in sulfur sensing.
    Front Plant Sci, 2014. 5: p. 710
    [PMID:25566284]
  3. Panda SK,Sunkar R
    Nutrient- and other stress-responsive microRNAs in plants: Role for thiol-based redox signaling.
    Plant Signal Behav, 2015. 10(4): p. e1010916
    [PMID:25912823]
  4. Wawrzyńska A,Sirko A
    EIN3 interferes with the sulfur deficiency signaling in Arabidopsis thaliana through direct interaction with the SLIM1 transcription factor.
    Plant Sci., 2016. 253: p. 50-57
    [PMID:27968996]