PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID HL.SW.v1.0.G018248.1
Organism
Humulus lupulus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus
Family bZIP
Protein Properties Length: 257aa    MW: 28303.6 Da    PI: 6.0781
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
HL.SW.v1.0.G018248.1genomeHOPBASEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_128.43.6e-0991136651
                           HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                bZIP_1   6 rerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkelee 51 
                           + ++   NReA r++R++Kka  + Lee+vk+L   N++L k+l++
  HL.SW.v1.0.G018248.1  91 KSKKSSGNREAVRKYREKKKAHAAYLEEEVKKLRMVNQKLVKKLQR 136
                           5688888************************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.0E-1183154No hitNo description
SMARTSM003381.2E-584153IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.93E-790136No hitNo description
PfamPF077163.7E-1091140IPR004827Basic-leucine zipper domain
CDDcd146863.11E-1098144No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    Send to blast
MKAKVDDGEL ETSDDPLLPN ENSSTNFHDS MSVDSFIDDL LKNARTCTHT HTCNPPGPDS  60
AHTHTCYHTH TQVLASEDDD HTTNKEHSGS KSKKSSGNRE AVRKYREKKK AHAAYLEEEV  120
KKLRMVNQKL VKKLQRQTVL EAEVLRLRSL LIDLRGKIDD ELGSFPFKKL CNTTTIFKEG  180
DCELQPAGGV LGLQCETDSP CFHSHVGSSS QVTAGVNGQM VAPWKENCQP VIADCQANIN  240
EISSADLQAM DATQPE*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1120132KKLRMVNQKLVKK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010104020.21e-129basic leucine zipper 23, partial
TrEMBLA0A2P5AN531e-150A0A2P5AN53_TREOI; Basic-leucine zipper transcription factor
STRINGXP_010104020.11e-114(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF25673277
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G16770.14e-54bZIP family protein