PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID HL.SW.v1.0.G020651.1
Organism
Humulus lupulus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus
Family bZIP
Protein Properties Length: 201aa    MW: 22823.4 Da    PI: 7.9564
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
HL.SW.v1.0.G020651.1genomeHOPBASEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_135.42.4e-1191137551
                           CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkelee 51 
                           ++ rr+++NRe+ArrsR RK+  +e+L+++v  L  eN++L ++l  
  HL.SW.v1.0.G020651.1  91 RKRRRMISNRESARRSRMRKQRHLENLRNEVNRLRVENRELTNQLRL 137
                           5789*************************************987765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1707.0E-1182137No hitNo description
SMARTSM003389.0E-1587151IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.01389152IPR004827Basic-leucine zipper domain
PfamPF001706.0E-891137IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.12E-1191138No hitNo description
CDDcd147023.66E-2092143No hitNo description
PROSITE patternPS00036094109IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 201 aa     Download sequence    Send to blast
MFPSSDSILG NPFPSFDGGF TPWDYLDLLP AVQTPEPVEF TSNSAGSGDT MAQSSKPIMS  60
VSGSGSDDPN SNRSNSKREC PDQPSSVVDE RKRRRMISNR ESARRSRMRK QRHLENLRNE  120
VNRLRVENRE LTNQLRLFSC HFQCVRTENG QLQSEHAALR QKLYDINQIL LFRQLQQFSS  180
PTYIEPCNDV ISEQTPSLIT *
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
19094RKRRR
2103110RRSRMRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010106904.12e-75light-inducible protein CPRF2
TrEMBLA0A2P5FS863e-98A0A2P5FS86_TREOI; Basic-leucine zipper transcription factor
STRINGXP_010106904.16e-75(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF54353254
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49760.15e-22basic leucine-zipper 5