PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID HL.SW.v1.0.G027079.1
Organism
Humulus lupulus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus
Family bZIP
Protein Properties Length: 130aa    MW: 14605.5 Da    PI: 9.8824
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
HL.SW.v1.0.G027079.1genomeHOPBASEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_145.91.3e-143590560
                          CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklk 60
                          ++ +r+q+NRe+ArrsRqRK++ ++eL   v++L +eN +    ++  +++  +++
  HL.SW.v1.0.G027079.1 35 RKRKRMQSNRESARRSRQRKQQHLDELMGQVANLRKENNQILTSISITTQHLMSVE 90
                          5779**********************************998887776666666555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.9E-193195IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1709.1E-123284No hitNo description
PROSITE profilePS5021711.073396IPR004827Basic-leucine zipper domain
PfamPF001701.6E-113580IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.38E-123588No hitNo description
CDDcd147029.79E-143687No hitNo description
PROSITE patternPS0003603853IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 130 aa     Download sequence    Send to blast
MASSSGNSSG STQLIMVQNN SGSEEDLKVL MDHERKRKRM QSNRESARRS RQRKQQHLDE  60
LMGQVANLRK ENNQILTSIS ITTQHLMSVE AENSVLRAQM EELGQRLQSL NDILNYINDV  120
KVAVVVVVV*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14753RRSRQRK
24754RRSRQRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds to the DNA G-box motif 5'-CACGTG-3' of MAN7 promoter. Involved in the positive regulation of seed germination through MAN7 gene activation. MAN7 is required for both, loosening of the micropylar endosperm, and rupture of the seed coat in germinating seeds. {ECO:0000269|PubMed:23461773}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_023900550.11e-50bZIP transcription factor 44-like
SwissprotC0Z2L51e-37BZP44_ARATH; bZIP transcription factor 44
TrEMBLA0A2P5EZK32e-53A0A2P5EZK3_TREOI; Basic-leucine zipper transcription factor
STRINGXP_010110029.15e-50(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF61334147
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75390.11e-38basic leucine-zipper 44
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  2. Pedrotti L, et al.
    Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness.
    Plant Cell, 2018. 30(2): p. 495-509
    [PMID:29348240]