PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID HL.SW.v1.0.G027311.1
Organism
Humulus lupulus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus
Family bZIP
Protein Properties Length: 199aa    MW: 21675.8 Da    PI: 8.1715
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
HL.SW.v1.0.G027311.1genomeHOPBASEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_147.24.9e-151541063
                          HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                bZIP_1 10 kqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
                          + +NRe+ArrsR+RK+a ++ Le  v++L +eN++L k+l e + ++ + ++++
  HL.SW.v1.0.G027311.1  1 MVSNRESARRSRRRKQAHLADLEIQVEQLRGENSSLYKQLTEASHQCREADTDN 54
                          579*****************************************9999887766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF579591.85E-10146No hitNo description
PROSITE profilePS502179.553146IPR004827Basic-leucine zipper domain
PfamPF001701.4E-11149IPR004827Basic-leucine zipper domain
SMARTSM003383.6E-7356IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.2E-10348No hitNo description
CDDcd147025.34E-71048No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    Send to blast
MVSNRESARR SRRRKQAHLA DLEIQVEQLR GENSSLYKQL TEASHQCREA DTDNRVLKSD  60
VEAMRARVKL AETSSLNQLI QSHLNTTTSA ASILAHFNTT TNSSSSTTTT TSNNNNPPNV  120
SPTITVHGNS NHHHCHHRHD DAAASFPVAG LIVGLRNTNN INHNNSIPPP IQSQINNIAP  180
NSGMMSSDSV SCVSDIWP*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1815RRSRRRKQ
21015SRRRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022730674.11e-43basic leucine zipper 9
TrEMBLA0A2P5DT356e-51A0A2P5DT35_PARAD; Basic-leucine zipper transcription factor
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF41953458
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G24800.12e-24basic leucine zipper 9