PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID HL.SW.v1.0.G028698.1
Organism
Humulus lupulus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus
Family Trihelix
Protein Properties Length: 174aa    MW: 18716.1 Da    PI: 6.7029
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
HL.SW.v1.0.G028698.1genomeHOPBASEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix379e-12132169138
              trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm 38 
                           rW++qe+l+L+e+r+ ++++++++++k+plW+evs++ 
  HL.SW.v1.0.G028698.1 132 RWPRQETLTLLEIRSCLDSKFKEANQKGPLWDEVSRYA 169
                           8**********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 174 aa     Download sequence    Send to blast
MEMEDQYGMA DLRQLMNGTR SHFPAIPQST ELFPGHRPGI SPAVQPFEMM MMGGHPVVGP  60
AADIMPRGFH HHHHHHHQHH QFMRSDSAAT SGGASITTIT ATSAPSLSGG GGGLELAESG  120
GCLGMMDGGT GRWPRQETLT LLEIRSCLDS KFKEANQKGP LWDEVSRYAL SFG*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024923498.16e-43trihelix transcription factor PTL
TrEMBLA0A2P5C4R97e-64A0A2P5C4R9_TREOI; GAMYB transcription factor
STRINGXP_008241284.17e-42(Prunus mume)
STRINGEMJ053265e-42(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2109433
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03680.19e-17Trihelix family protein