PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Han000391

Organism

Helianthus annuus

Taxonomic ID

4232

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Heliantheae alliance; Heliantheae; Helianthus

Family

NAC

Protein Properties

Length: 244aa MW: 27787.2 Da PI: 7.3617

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Han#S32082456	PU_ref	Unigene	View CDS
PUT-169a-Helianthus_annuus-45110	PU_unref	plantGDB	View CDS
PUT-169a-Helianthus_annuus-45111	PU_unref	plantGDB	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	162.3	1.8e-50	14	143	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kg 97 lp+G+rF+Ptdeelv++yL+ k++g + e+ ++i+evd++k ePwdLp + +++ ++ew+fF+++d+ky++g+r+nrat sgyWkatgkd++++++ ++ Han000391 14 LPVGYRFRPTDEELVNHYLRLKINGCDKEV-SCIREVDVCKKEPWDLPdlSVIESIDNEWFFFCPKDRKYQNGQRSNRATVSGYWKATGKDRTIKTNrGN 112 799**********************999.89**********96447788899********************************998567 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 +++g kktLvfy+grapkge+t+Wv+hey + Han000391 113 SVIGKKKTLVFYTGRAPKGERTHWVIHEYCA 143 789************************75 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	5.23E-57	10	166	IPR003441	NAC domain
PROSITE profile	PS51005	54.759	14	166	IPR003441	NAC domain
Pfam	PF02365	2.6E-26	15	142	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 244 aa Download sequence Send to blast
MEVVPVKSLP IRSLPVGYRF RPTDEELVNH YLRLKINGCD KEVSCIREVD VCKKEPWDLP 60 DLSVIESIDN EWFFFCPKDR KYQNGQRSNR ATVSGYWKAT GKDRTIKTNR GNSVIGKKKT 120 LVFYTGRAPK GERTHWVIHE YCATEKELDG THPGQSPFVL CRLFKKYDGK DENGESGDCV 180 DVDQSDASPL SVVKSSMEEA QSEPGLTRSQ NVQPPTNRIL KTRDYERNGD MLGFYDCQDH 240 GIGS

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
1ut4_A	1e-43	13	166	16	165	NO APICAL MERISTEM PROTEIN
1ut4_B	1e-43	13	166	16	165	NO APICAL MERISTEM PROTEIN
1ut7_A	1e-43	13	166	16	165	NO APICAL MERISTEM PROTEIN
1ut7_B	1e-43	13	166	16	165	NO APICAL MERISTEM PROTEIN
3swm_A	1e-43	13	166	19	168	NAC domain-containing protein 19
3swm_B	1e-43	13	166	19	168	NAC domain-containing protein 19
3swm_C	1e-43	13	166	19	168	NAC domain-containing protein 19
3swm_D	1e-43	13	166	19	168	NAC domain-containing protein 19
3swp_A	1e-43	13	166	19	168	NAC domain-containing protein 19
3swp_B	1e-43	13	166	19	168	NAC domain-containing protein 19
3swp_C	1e-43	13	166	19	168	NAC domain-containing protein 19
3swp_D	1e-43	13	166	19	168	NAC domain-containing protein 19
4dul_A	1e-43	13	166	16	165	NAC domain-containing protein 19
4dul_B	1e-43	13	166	16	165	NAC domain-containing protein 19
Search in ModeBase

Expression -- Description ? help Back to Top
Source	Description
Uniprot	TISSUE SPECIFICITY: Expressed in roots, rosette leaves, cauline leaves, shoot apex, stems and flowers. {ECO:0000269\|PubMed:17158162}.

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator activated by proteolytic cleavage through regulated intramembrane proteolysis (RIP). {ECO:0000250\|UniProtKB:Q949N0}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By cold, heat and drought stresses. {ECO:0000269\|PubMed:17158162}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_021987609.1	1e-170	NAC domain-containing protein 62-like isoform X1
Refseq	XP_021987610.1	1e-170	NAC domain-containing protein 91-like isoform X2
Swissprot	B5X570	2e-79	NAC14_ARATH; NAC domain-containing protein 14
TrEMBL	A0A251TGU7	1e-168	A0A251TGU7_HELAN; Putative NAC domain-containing protein
STRING	Migut.F00136.1.p	1e-89	(Erythranthe guttata)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G33060.1	6e-82	NAC 014