PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Han002321

Organism

Helianthus annuus

Taxonomic ID

4232

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Heliantheae alliance; Heliantheae; Helianthus

Family

Dof

Protein Properties

Length: 260aa MW: 28322.2 Da PI: 10.7178

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Han#S18725715	PU_ref	Unigene	View CDS
PUT-169a-Helianthus_annuus-41585	PU_unref	plantGDB	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	120.2	7.5e-38	2	58	6	62
zf-Dof 6 lkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 l+cprCdstntkfCy+nny+l+qPr+fCk+CrryWt+GGalrnvPvGgg+r+nk+ss Han002321 2 LNCPRCDSTNTKFCYFNNYNLTQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRSS 58 68****************************************************986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50884	29.758	2	56	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	8.4E-32	2	56	IPR003851	Zinc finger, Dof-type
ProDom	PD007478	1.0E-21	2	47	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	4	40	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 260 aa Download sequence Send to blast
XLNCPRCDST NTKFCYFNNY NLTQPRHFCK TCRRYWTRGG ALRNVPVGGG CRRNKRSSKS 60 RSSKSPRQSG PKSVSVSPPR STNSDMTSTQ LSRPPSLHLP FMSSLSQFGG VGGNLSSNLA 120 GFQPPSDQMG NFQMGNGNIL SIGGGDNWRL PFLPGFEVPN NNNNNLFNYQ TEGVGAQSSS 180 MVGGDTRLKS SSGIDNPSEG SVKMEDNRGL NLSRQFLGML GNTTNQQAWN GKHSWGEFPG 240 VSPSTTHFPI LRKIDQSNVA

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_022013220.1	1e-176	dof zinc finger protein DOF5.1-like
TrEMBL	A0A251SCT0	1e-175	A0A251SCT0_HELAN; Putative zinc finger, Dof-type
STRING	Aquca_003_00022.1	1e-56	(Aquilegia coerulea)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28810.2	1e-30	Dof family protein