PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Han002438

Organism

Helianthus annuus

Taxonomic ID

4232

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Heliantheae alliance; Heliantheae; Helianthus

Family

bZIP

Protein Properties

Length: 255aa MW: 28755.9 Da PI: 9.7709

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Han#S18764506	PU_ref	Unigene	View CDS
PUT-169a-Helianthus_annuus-57462	PU_unref	plantGDB	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	49.3	1.1e-15	185	228	5	48
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 +r++r++kNRe+A rsR+RK+a++ eLe+kv Le+eN++L+ e Han002438 185 RRQKRMIKNRESAARSRARKQAYTHELENKVSRLEEENERLRRE 228 79***************************************976 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	2.0E-14	179	228	No hit	No description
PRINTS	PR00041	4.6E-5	180	196	IPR001630	cAMP response element binding (CREB) protein
SMART	SM00338	1.1E-13	181	253	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.84	183	228	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	4.75E-11	185	230	No hit	No description
CDD	cd14707	8.05E-18	185	215	No hit	No description
Pfam	PF00170	3.8E-13	185	229	IPR004827	Basic-leucine zipper domain
PROSITE pattern	PS00036	0	188	203	IPR004827	Basic-leucine zipper domain
PRINTS	PR00041	4.6E-5	198	218	IPR001630	cAMP response element binding (CREB) protein
PRINTS	PR00041	4.6E-5	218	235	IPR001630	cAMP response element binding (CREB) protein

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 255 aa Download sequence Send to blast
XLDELLKSVY SAETNQGTSS NAVNYTELNS GVTKKTVDEV WQDIQQGQRK KKNDSDDDGS 60 NVSKGGSFKS GDGKRQRTLG EMTLEDFLVK AGVVAESSPG KVNEEGNLEP QETQWIGYQS 120 HAVQQQNMIM AGHYQVQPSV TVPGNSLMDV GYMSPTSLMG SLSDRHMSGR KRFASGDVME 180 KTVERRQKRM IKNRESAARS RARKQAYTHE LENKVSRLEE ENERLRREKE VEKVIPWVPP 240 PKPKYQLRRT SSAPF

Expression -- Description ? help Back to Top
Source	Description
Uniprot	DEVELOPMENTAL STAGE: Expressed in embryo during the latest stages of seed maturation. {ECO:0000269\|PubMed:15642716}.
Uniprot	TISSUE SPECIFICITY: Predominantly expressed in seeds. {ECO:0000269\|PubMed:12376636}.

Functional Description ? help Back to Top
Source	Description
UniProt	Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_021988247.1	0.0	ABSCISIC ACID-INSENSITIVE 5-like protein 2
Swissprot	Q9LES3	5e-73	AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBL	A0A251TJ82	0.0	A0A251TJ82_HELAN; Putative ABA-responsive element binding protein 3
STRING	XP_009614068.1	5e-86	(Nicotiana tomentosiformis)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56850.1	3e-51	ABA-responsive element binding protein 3

Publications ? help Back to Top
Kim H, et al. ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis. Plant Mol. Biol., 2016. 90(3): p. 303-15 [PMID:26667153] Song C,Kim T,Chung WS,Lim CO The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions. Mol. Cells, 2017. 40(8): p. 577-586 [PMID:28756655]