PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Han002534
Organism
Helianthus annuus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Heliantheae alliance; Heliantheae; Helianthus
Family bZIP
Protein Properties Length: 252aa    MW: 28309.9 Da    PI: 4.7219
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Han#S32083906PU_unrefUnigeneView CDS
PUT-169a-Helianthus_annuus-5506PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_125.62.6e-08119174459
                XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 
                 k+ +r  +NR AA rsR+RKk+ ++ Le k+   e+e ++L + l+ +  e ++l
  Han002534 119 AKKRKRQLRNRDAALRSRERKKMHVKDLELKSRYYEGECRRLGSLLQWYMAENQAL 174
                7999*********************************9999999888888887776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1705.2E-10108178No hitNo description
SMARTSM003381.8E-7111180IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.174118175IPR004827Basic-leucine zipper domain
PfamPF001701.0E-7119175IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.63E-10120178No hitNo description
CDDcd147047.53E-13121172No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    Send to blast
XLLLLLLNNN LINLHLQFHR MEDWDNLFDF DLTFPTDDDV IIPPDDDVNN QSPPLSVDDI  60
EQLLFKDDDD DQLPTDAFLD DILLDSPLQE EKSGEVVDCS DSAEDQKNEE EKDDDDPLAK  120
KRKRQLRNRD AALRSRERKK MHVKDLELKS RYYEGECRRL GSLLQWYMAE NQALRFSLHS  180
SSSNASMTKQ ESAXALVGIP AGGFPALVNG HNGCPSQPCT TTSAAPPKSK STGNRGRRKA  240
STKSGSKEKG RG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1120139KRKRQLRNRDAALRSRERKK
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Han.55250.0embryo| leaf
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022008590.11e-100bZIP transcription factor 60
TrEMBLA0A251SDC65e-99A0A251SDC6_HELAN; Putative basic-leucine zipper domain-containing protein
STRINGPOPTR_0005s27930.12e-40(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G42990.15e-15basic region/leucine zipper motif 60