PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Han002958
Organism
Helianthus annuus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Heliantheae alliance; Heliantheae; Helianthus
Family bZIP
Protein Properties Length: 230aa    MW: 26478.5 Da    PI: 6.5126
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Han#S32093084PU_unrefUnigeneView CDS
PUT-169a-Helianthus_annuus-14800PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_146.38.9e-15117175563
                CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                ++ rr+++NRe+ArrsR RK++ ++eL   v  L  eN++L++++++ +++ +++ +e+
  Han002958 117 RKRRRMISNRESARRSRMRKQKHLDELWSQVVWLRHENQQLIEKMNKFTETHEQVVQEN 175
                5789***********************************************99998887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.5E-13113177IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.841115178IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.1E-11117171No hitNo description
SuperFamilySSF579591.13E-12117167No hitNo description
PfamPF001702.2E-12117170IPR004827Basic-leucine zipper domain
CDDcd147024.69E-19118168No hitNo description
PROSITE patternPS000360120135IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    Send to blast
XSAGTQPQQV SKFQSKPIPC QTCTTLIRIR FVFVFTVMQA SEITDFHYLA PTIQNLNTAH  60
LTMNLGNSPN IPFDVNALAN PFYQLHMNPL VQDISLPSIY STSDEADEQQ QSLINERKRR  120
RMISNRESAR RSRMRKQKHL DELWSQVVWL RHENQQLIEK MNKFTETHEQ VVQENTRLKG  180
EVSGLREMVT DMQLNGNYPA ISDLDDINCN DAYFKTESSN QSGSSSSDFI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1116120RKRRR
2116137RKRRRMISNRESARRSRMRKQK
3129136RRSRMRKQ
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021983133.11e-142basic leucine zipper 43-like
TrEMBLA0A251TX351e-141A0A251TX35_HELAN; Putative basic-leucine zipper domain-containing protein
STRINGPOPTR_0004s10990.11e-63(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G30530.13e-42basic leucine-zipper 42