PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Han004720

Organism

Helianthus annuus

Taxonomic ID

4232

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Heliantheae alliance; Heliantheae; Helianthus

Family

G2-like

Protein Properties

Length: 306aa MW: 34794.5 Da PI: 10.3143

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Han#S32093400	PU_ref	Unigene	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	102.3	3.1e-32	180	233	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt++LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ Han004720 180 PRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLSHVKSHLQMYRT 233 9****************************************************7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF46689	1.4E-15	177	233	IPR009057	Homeodomain-like
Gene3D	G3DSA:1.10.10.60	2.1E-28	178	233	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	9.8E-24	180	233	IPR006447	Myb domain, plants
Pfam	PF00249	1.7E-7	181	232	IPR001005	SANT/Myb domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 306 aa Download sequence Send to blast
XRGTDHHNDL DLVNLWKRAL NSQHMHQHQQ QQHQQQQQQQ QQHGSTRRLE PSFGLALSNP 60 GSTHSTHSDL THFHNLLTQN TNTATSIIYP YQQHQNHHHG FSSDLGFLRP IRGVPVYYQN 120 APPPNFPILA HPHQKNQPLL DSCTNSTTTS SIIHGNNINN IVRSRFLSSR FPSKRSMRAP 180 RMRWTTTLHA RFVHAVELLG GHERATPKSV LELMDVKDLT LSHVKSHLQM YRTVKTTDRA 240 PASSGQSDLY ENASSGDNSD DILLDIGNPR TKNYQLKMEE GLVFTRRKII SMVYGAILQG 300 KLGCKX

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4k_A	2e-16	181	235	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B	2e-16	181	235	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A	2e-16	181	235	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B	2e-16	181	235	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C	2e-16	181	235	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D	2e-16	181	235	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A	2e-16	181	235	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C	2e-16	181	235	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D	2e-16	181	235	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F	2e-16	181	235	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H	2e-16	181	235	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J	2e-16	181	235	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_022020680.1	1e-157	probable transcription factor KAN2
TrEMBL	A0A251RM71	1e-156	A0A251RM71_HELAN; Putative homeodomain-like superfamily protein
STRING	GLYMA01G01875.1	4e-76	(Glycine max)
STRING	XP_007158256.1	5e-76	(Phaseolus vulgaris)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32240.1	3e-56	G2-like family protein