PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Han005762
Organism
Helianthus annuus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Heliantheae alliance; Heliantheae; Helianthus
Family GRF
Protein Properties Length: 261aa    MW: 29412.8 Da    PI: 7.6197
Description GRF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Han#S48339712PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRC789.5e-25101143244
        WRC   2 aepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 
                 epgrCrRtDGKkWRCs+++++++k+CErH+hrgr+rsrk++e
  Han005762 101 LEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVE 143
                69**************************************987 PP
2QLQ561.2e-192155236
        QLQ  2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36
                FTa+Q+++L++Q+l+yKy+++++PvP +L++ ++
  Han005762 21 VFTASQWEELEQQALIYKYMVSGVPVPTDLILSVR 55
               5******************************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM009513.1E-92056IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166621.0612156IPR014978Glutamine-Leucine-Glutamine, QLQ
PfamPF088806.0E-142254IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166724.542100144IPR014977WRC domain
PfamPF088794.3E-21102143IPR014977WRC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005524Molecular FunctionATP binding
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    Send to blast
XDRLRSDDDH EYYIADINAY VFTASQWEEL EQQALIYKYM VSGVPVPTDL ILSVRRSLYN  60
TSASSLSNQH TSSLRIWEAG SSFPYNQLYQ IGGYGGRKID LEPGRCRRTD GKKWRCSKEA  120
YPDSKYCERH MHRGRNRSRK PVEFSSSSSS SSSAATSVNN VSSSSAISKS IDAYPPPFST  180
FMDSSSYSHH TLKDDTQMQG MKDLGEDERS SAAAAAYFQL NDPYTATTQS GQQTLSFQFS  240
NPEDEHKRSR AALFGRLLIQ X
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Han.65450.0embryo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021984547.11e-137growth-regulating factor 5-like isoform X1
TrEMBLA0A251U0Q91e-136A0A251U0Q9_HELAN; Putative WRC domain, Glutamine-Leucine-Glutamine, QLQ, Growth-regulating factor
STRINGXP_006490822.15e-50(Citrus sinensis)
STRINGXP_006451560.15e-50(Citrus clementina)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13960.16e-45growth-regulating factor 5