PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Han006447
Organism
Helianthus annuus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Heliantheae alliance; Heliantheae; Helianthus
Family ERF
Protein Properties Length: 240aa    MW: 27896.1 Da    PI: 6.5816
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-169a-Helianthus_annuus-36955PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.92.8e-1978126355
        AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                y+G+r+++ +g+W+AeIrdp++     r++lg+f taeeAa+a+++ ++k++g
  Han006447  78 YRGIRQRP-WGKWAAEIRDPRK---GVRVWLGTFNTAEEAARAYDKEARKIRG 126
                9*******.**********954...4*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003803.3E-3977140IPR001471AP2/ERF domain
PROSITE profilePS5103223.99977134IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.1E-3277135IPR001471AP2/ERF domain
SuperFamilySSF541711.77E-2277135IPR016177DNA-binding domain
PfamPF008475.3E-1278126IPR001471AP2/ERF domain
PRINTSPR003675.4E-127889IPR001471AP2/ERF domain
CDDcd000188.81E-3278134No hitNo description
PRINTSPR003675.4E-12100116IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    Send to blast
MCGGAIVSDL IRSSRRLKNS SSDVWPEFNP YEAEFNNAYE AEFNQFVQQT DSDYHKRPLP  60
YSGGMHETTR KKQRKNLYRG IRQRPWGKWA AEIRDPRKGV RVWLGTFNTA EEAARAYDKE  120
ARKIRGRKAK VNFPSDEEEE YFNRKNPNLN NYNDILLGFS DEEVMGPRLV KENEKKKKKV  180
EEVVRKEENE VQKLSEELMA YESYMKFYDI PYLEGQPSAV APANADGGGS IELWSFDDVA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A4e-2178134663ATERF1
3gcc_A4e-2178134663ATERF1
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Han.65740.0embryo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021969365.11e-178ethylene-responsive transcription factor ERF071-like
TrEMBLA0A251UFG21e-176A0A251UFG2_HELAN; Putative integrase-type DNA-binding superfamily protein
STRINGXP_009608570.11e-68(Nicotiana tomentosiformis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47520.13e-44ERF family protein