PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Han006853
Organism
Helianthus annuus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Heliantheae alliance; Heliantheae; Helianthus
Family GeBP
Protein Properties Length: 225aa    MW: 25027.4 Da    PI: 4.7472
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Han#S48340619PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF573109.22.9e-34132224291
     DUF573   2 lfqrlwseeDeivlLqGlidfkaktgk...spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifel 91 
                lfqrlwse+Deiv+L+G+id+k + g    ++  d+ af+ef+kks++++vs+ qlv+KirrLKkK+ ++v+k k+gk+ sfsk+h+q  fe+
  Han006853 132 LFQRLWSEDDEIVILKGMIDYKGESGEnngNVIGDTGAFHEFIKKSLHVDVSRAQLVDKIRRLKKKYVNNVSKEKDGKDRSFSKSHEQRGFEF 224
                79**********************9997766777********************************************************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045045.5E-29133224IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    Send to blast
MADNDLKPNY SSSEDESEEP SGTEDEHSSD TESDQPPNSP QNPQKTLISP ESEQSGSGTD  60
SDSDSPAVAD PNIKPIRSIP MEPEELGQKS ELLPAQARSK RPAVCSPATV NEKEAKKPKS  120
NHSIEEESKK QLFQRLWSED DEIVILKGMI DYKGESGENN GNVIGDTGAF HEFIKKSLHV  180
DVSRAQLVDK IRRLKKKYVN NVSKEKDGKD RSFSKSHEQR GFEFV
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021979121.11e-160probable transcription factor At1g11510
TrEMBLA0A251VPH81e-159A0A251VPH8_HELAN; Putative DNA-binding storekeeper protein-related transcriptional regulator
STRINGXP_008439944.12e-39(Cucumis melo)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G11510.14e-27DNA-binding storekeeper protein-related transcriptional regulator