PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Han007511
Organism
Helianthus annuus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Heliantheae alliance; Heliantheae; Helianthus
Family G2-like
Protein Properties Length: 194aa    MW: 21303.3 Da    PI: 8.8583
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Han#S48347735PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like109.12.3e-341670155
    G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
               k+rlrWt+eLHerFv+av+qLGG+++AtPk +l++m+v+gLt++hvkSHLQkYRl
  Han007511 16 KQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRL 70
               79****************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129414.4851373IPR017930Myb domain
SuperFamilySSF466893.23E-181570IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.609.4E-331571IPR009057Homeodomain-like
TIGRFAMsTIGR015575.1E-261671IPR006447Myb domain, plants
PfamPF002495.5E-101869IPR001005SANT/Myb domain
PfamPF143791.3E-21103148IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 194 aa     Download sequence    Send to blast
MDVVNGSNNS PSLASKQRLR WTHELHERFV DAVAQLGGPD RATPKGVLRV MGVQGLTIYH  60
VKSHLQKYRL AKYLPDSSSE GKAFDQKESG DMLSSLDGSS GLQITEQLKL QMEVQKRLHE  120
QLEVQKQLQL RIEAQGKYLK KIIEEQQRLG GVLADAPGAA DESKSXTDPM TPAAPGITER  180
RXALNTDSGS SIGX
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4r_A8e-261673158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B8e-261673158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C8e-261673158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D8e-261673158Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022025622.11e-133myb family transcription factor PHL7-like isoform X1
SwissprotQ9SJW06e-95PHL7_ARATH; Myb family transcription factor PHL7
TrEMBLA0A251RS111e-132A0A251RS11_HELAN; Putative myb-like HTH transcriptional regulator family protein
STRINGXP_002525238.11e-100(Ricinus communis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01060.19e-86G2-like family protein