PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Han007557
Organism
Helianthus annuus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Heliantheae alliance; Heliantheae; Helianthus
Family Trihelix
Protein Properties Length: 192aa    MW: 21616.1 Da    PI: 8.4882
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-169a-Helianthus_annuus-37517PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix51.23.4e-16100188182
   trihelix   1 rWtkqevlaLiearremeerlrrgk.........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyf 82 
                +W + +v++Li+a+++++e+  +           +kk++W++vsk+m+erg  +sp+qC++k+  +++ryk + +++++ ts+ ++t p+ 
  Han007557 100 KWNDLMVRLLITAVSYIGEDAADYGgsrrkfsnlQKKGKWKSVSKVMAERGHFVSPQQCEDKFM-IKQRYKXLMKSRRG-TSGGVETLPLI 188
                7**************9998888632234556677*****************************5.9*******999997.68888888775 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138372.6E-1498178No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    Send to blast
MEGGNLSSSG GSGGSFDLQR VHHHQQQGSM ILPCVHENFP FRIGTETIPD CNRTISLAAE  60
FGKGETRAMS GEEDEPSFTE QDDRAKNVNM NFTSPWQRVK WNDLMVRLLI TAVSYIGEDA  120
ADYGGSRRKF SNLQKKGKWK SVSKVMAERG HFVSPQQCED KFMIKQRYKX LMKSRRGTSG  180
GVETLPLIDD QF
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021997420.11e-108uncharacterized protein LOC110894505
RefseqXP_021997421.11e-108uncharacterized protein LOC110894505
TrEMBLA0A124SE091e-57A0A124SE09_CYNCS; Uncharacterized protein (Fragment)
TrEMBLA0A2J6LR103e-57A0A2J6LR10_LACSA; Uncharacterized protein
STRINGEOY167054e-52(Theobroma cacao)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21200.12e-39sequence-specific DNA binding transcription factors