PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Han007706
Organism
Helianthus annuus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Heliantheae alliance; Heliantheae; Helianthus
Family bHLH
Protein Properties Length: 183aa    MW: 20455.7 Da    PI: 6.2856
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-169a-Helianthus_annuus-24868PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH15.53e-051321701355
                HHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
        HLH  13 RdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                R+++++    Lr ++P      +  ++ +++L +Av+Y+ksL+
  Han007706 132 REKMKKMVKSLRGIVPGG----NAEMNTVDVLDEAVKYLKSLK 170
                8899999999******97....799***************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508889.902119169IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.5E-7131176IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.06E-8132177IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.56E-4132172No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    Send to blast
RGPTYFPHIK IKRLVFGQNV TSSIKGLPEK LRNFDRADNC NQVMYTPGIN TAPMQKDKYT  60
PRVTEEDSAD IDALLSYDDE DENEEYEDDE VSTARTYGDD TYDTSDSCSS RRRNKWVGST  120
SSHGSKGSSG KREKMKKMVK SLRGIVPGGN AEMNTVDVLD EAVKYLKSLK VEAHKMGFGN  180
LPG
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021980814.15e-82transcription factor bHLH144-like
TrEMBLA0A251V0E72e-66A0A251V0E7_HELAN; Putative basic helix-loop-helix (BHLH) DNA-binding superfamily protein
STRINGMigut.H01376.1.p1e-29(Erythranthe guttata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29950.29e-11bHLH family protein