PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Han008006
Organism
Helianthus annuus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Heliantheae alliance; Heliantheae; Helianthus
Family ZF-HD
Protein Properties Length: 161aa    MW: 18034.5 Da    PI: 6.5523
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Han#S48355459PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer92.83e-293186460
  ZF-HD_dimer  4 vrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreveee 60
                 +rYkeClkNhA+ +G +avDGCgEfm++ geegt ++lkCaA +CHRnFHR+eve +
    Han008006 31 YRYKECLKNHAVGIGRQAVDGCGEFMAA-GEEGTLDGLKCAAYNCHRNFHRKEVEGQ 86
                 79*************************9.999*********************9865 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD1257743.0E-211984IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PfamPF047703.2E-263183IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
TIGRFAMsTIGR015664.7E-273283IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PROSITE profilePS5152324.3083382IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
Sequence ? help Back to Top
Protein Sequence    Length: 161 aa     Download sequence    Send to blast
MEFDEHEDHE DEIVGIQMPV PPVKTTGGGG YRYKECLKNH AVGIGRQAVD GCGEFMAAGE  60
EGTLDGLKCA AYNCHRNFHR KEVEGQQRDN QHIQHQHHHH HHHQPQYITA APYNYHQRPA  120
GYLHMKAVPS SVHQQRPLAL PSSASREDLE EDSNPSSSGG X
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Han.63980.0embryo
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor. {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022039850.12e-84zinc-finger homeodomain protein 1-like
SwissprotA2Z2594e-31ZHD1_ORYSI; Zinc-finger homeodomain protein 1
TrEMBLA0A251UUZ25e-83A0A251UUZ2_HELAN; Putative zinc-finger homeodomain protein 2
STRINGXP_010266504.11e-38(Nelumbo nucifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24660.12e-27homeobox protein 22