PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Han008376
Organism
Helianthus annuus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Heliantheae alliance; Heliantheae; Helianthus
Family HD-ZIP
Protein Properties Length: 123aa    MW: 14230.5 Da    PI: 4.6656
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Han#S48345243PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox40.93.6e-1367113349
                --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHH CS
   Homeobox   3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFq 49 
                k++++t++q++ Le+   +n+++  e++ +LAk+l+L+ rqV +WFq
  Han008376  67 KKRRLTTDQVQFLEKSCDENNKLEPERKVHLAKELNLQPRQVAIWFQ 113
                56789*****************************************9 PP
2HD-ZIP_I/II70.92.6e-2366113148
  HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFq 48 
                  ekkrrl+++qv++LE+s +e++kLeperKv+la+eL+lqprqva+WFq
    Han008376  66 EKKRRLTTDQVQFLEKSCDENNKLEPERKVHLAKELNLQPRQVAIWFQ 113
                  69********************************************** PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.609.1E-1452113IPR009057Homeodomain-like
SuperFamilySSF466892.01E-1353113IPR009057Homeodomain-like
PROSITE profilePS5007112.74662122IPR001356Homeobox domain
SMARTSM003891.7E-465122IPR001356Homeobox domain
PfamPF000461.7E-1067113IPR001356Homeobox domain
CDDcd000863.89E-1067113No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 123 aa     Download sequence    Send to blast
MEGGIVFESL LQNQTFNFSS DGFDSSWVSN SFHGEQTNAK KSVVSGQNEK EENSDEDYDN  60
CFRQPEKKRR LTTDQVQFLE KSCDENNKLE PERKVHLAKE LNLQPRQVAI WFQTVGLDAR  120
QNN
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022011850.16e-75homeobox-leucine zipper protein HAT5-like isoform X2
TrEMBLA0A251SC661e-73A0A251SC66_HELAN; Putative leucine zipper, homeobox-associated, Homeodomain-like protein
STRINGXP_009801498.11e-30(Nicotiana sylvestris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01470.12e-20homeobox 1