PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Han008714
Organism
Helianthus annuus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Heliantheae alliance; Heliantheae; Helianthus
Family GRF
Protein Properties Length: 201aa    MW: 22582.5 Da    PI: 10.5392
Description GRF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Han#S48334047PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRC73.52.4e-2389133145
        WRC   1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 
                d+ep+rCrRtDGKkWRC ++v +++k+CErH  + rsrsrk++e+
  Han008714  89 DPEPWRCRRTDGKKWRCAKDVAPDQKYCERHAYKIRSRSRKPVET 133
                79****************************************997 PP
2QLQ38.34.1e-143871235
        QLQ  2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqai 35
                FTa+Q+++L++Q  +y y++a  PvPp+Ll ++
  Han008714 38 LFTATQWEELERQKKIYMYIMACIPVPPQLLSPL 71
               5******************************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM009514.9E-53773IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166614.7663873IPR014978Glutamine-Leucine-Glutamine, QLQ
PfamPF088802.9E-83971IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166723.8989133IPR014977WRC domain
PfamPF088795.3E-2090132IPR014977WRC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005524Molecular FunctionATP binding
Sequence ? help Back to Top
Protein Sequence    Length: 201 aa     Download sequence    Send to blast
MGDGNGARVT NCDVGLGINF VSSCKKNGGV MGVSGKVLFT ATQWEELERQ KKIYMYIMAC  60
IPVPPQLLSP LSVQSNRVST GLKFSNGSDP EPWRCRRTDG KKWRCAKDVA PDQKYCERHA  120
YKIRSRSRKP VETQSQNLTI SAAHQQTRFM KNSSIPVSXS NNNQFQLPLQ SSSVGSRNDH  180
ISKQISREFN PQISTRRDII I
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022002024.11e-133growth-regulating factor 8-like
TrEMBLA0A251SVP91e-132A0A251SVP9_HELAN; Putative WRC domain, Glutamine-Leucine-Glutamine, QLQ, Growth-regulating factor
STRINGVIT_02s0025g02680.t012e-44(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37740.11e-28growth-regulating factor 2