PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Han008858

Organism

Helianthus annuus

Taxonomic ID

4232

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Heliantheae alliance; Heliantheae; Helianthus

Family

Trihelix

Protein Properties

Length: 240aa MW: 25339.1 Da PI: 5.1521

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Han#S32075945	PU_ref	Unigene	View CDS
PUT-169a-Helianthus_annuus-18209	PU_unref	plantGDB	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	42.6	1.6e-13	112	199	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm...rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W+ +ev L++ +e+ +l+r++l+ ++W+ v++ + +++ ++s +qCk+k +nl+kryk +++++++ +s+s++ +f++++ Han008858 112 EWSGSEVTILLDSFTEKYIALNRTNLRRKDWAVVANLVaegCDKQNRKSIEQCKNKVDNLKKRYKLETQRMESD-VGSVSSWIWFKKMD 199 5***********************************66555677889******************997.678889*****8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF13837	4.4E-16	110	199	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 240 aa Download sequence Send to blast
MASSPPLIEP ITAIANGDTL ITSAAVTSPA TTAAVTSPAT PAVVTSPATP AVVTSTATTA 60 VVTSPATPAV VTSPATTAED LAKFDPNNRP EKKQKLDSGA GTGDDHRRER EEWSGSEVTI 120 LLDSFTEKYI ALNRTNLRRK DWAVVANLVA EGCDKQNRKS IEQCKNKVDN LKKRYKLETQ 180 RMESDVGSVS SWIWFKKMDY LFGAATASEA AVSEAAAATV SEAASDDDKS AGLSSANKLX

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_022038406.1	1e-167	uncharacterized protein LOC110941096
TrEMBL	A0A251USX5	1e-165	A0A251USX5_HELAN; Putative aspartate/glutamate/uridylate kinase, Uridylate kinase, bacteria

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10030.2	8e-31	Trihelix family protein