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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Itr_sc000018.1_g00048.1 |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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| Family |
GATA |
| Protein Properties |
Length: 227aa MW: 25415.5 Da PI: 7.0294 |
| Description |
GATA family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Itr_sc000018.1_g00048.1 | genome | Kazusa | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GATA | 39.1 | 1e-12 | 36 | 62 | 8 | 34 |
GATA 8 kTplWRrgpdgnktLCnaCGlyyrkkg 34
+TplWR gp+ ++ LCnaCG ++r++g
Itr_sc000018.1_g00048.1 36 DTPLWRAGPEEKPVLCNACGSRWRLRG 62
6********99999***********98 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0008270 | Molecular Function | zinc ion binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 227 aa
Download sequence Send
to blast |
MNYMFTNDNS YSNHVYGMGK GEGNRGYRGL DDIGRDTPLW RAGPEEKPVL CNACGSRWRL 60
RGNLNGYVPK HGIRDASGNI HKLPSKMHAV EITSQQKLRA GEMPQGSDLR PTSPKGGEFS 120
ISSSESSVPS PVNCMLTQGT EVCLSGDEAQ WPVWYPKNVT RRKRSNLQKQ PSSLIDTLHL 180
QLYQIQQDLE DENKSEEEDI LVYNKWQYIP DSDIGLGNIL PKPPTAP
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