PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Itr_sc000100.1_g00048.1

Organism

Ipomoea trifida

Taxonomic ID

35884

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

bZIP

Protein Properties

Length: 437aa MW: 47638.8 Da PI: 9.7383

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Itr_sc000100.1_g00048.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	37.2	6.6e-12	344	399	5	59
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.HHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL.kkeleelkkevakl 59 +r rr++kNRe+A rsR+RK+a++ eLe +v++L++ N++L kk++e l+k ++ Itr_sc000100.1_g00048.1 344 RRRRRMIKNRESAARSRARKQAYTIELEAEVEKLKEINQELmKKQAEFLEKRKNQM 399 689***********************************998245566666665555 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	3.6E-13	340	405	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.519	342	394	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	2.2E-10	344	402	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	3.09E-9	344	392	No hit	No description
Gene3D	G3DSA:1.20.5.170	5.8E-13	344	400	No hit	No description
PROSITE pattern	PS00036	0	347	362	IPR004827	Basic-leucine zipper domain
CDD	cd14707	1.89E-21	349	398	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 437 aa Download sequence Send to blast
MMGSYLDFKN FVETPQPEGN GGKPASLFPL ARQSSIYSLT FDELQTTFSG LGKDFGSMNM 60 EDLLKSIWTA EESQPFQACC VGAGDNGSVP GGNLQRQGSL TLPRTLSQKT VDEVWKDFQK 120 DTGATKDCGY GGSSFGQRQS TLGEMTLEEF LFKAGVVREE MVPNSVGFAS SVAQLNSMGF 180 QEPGKQITDN NSAAFPGASN SMLSVGATRS SQQQPLQHHQ QLQLHQPLFP KQTTLTFASP 240 MQLQNNAQQA RSGARRPALG MPSPPHNTNP VQGELIQGSA NSMAGLRQNG AAGGGGGSPG 300 IPLSSDVALN SNLGMSSLSP TPYAFNEGGR GRRACNSIEK VVERRRRRMI KNRESAARSR 360 ARKQAYTIEL EAEVEKLKEI NQELMKKQAE FLEKRKNQMR EKMFVPWESK PRCLKRTLTG 420 PCQSLIRLGG LDNVLHV

Sequence ? help Back to Top

Protein Sequence Length: 437 aa Download sequence Send to blast

MMGSYLDFKN FVETPQPEGN GGKPASLFPL ARQSSIYSLT FDELQTTFSG LGKDFGSMNM  60
EDLLKSIWTA EESQPFQACC VGAGDNGSVP GGNLQRQGSL TLPRTLSQKT VDEVWKDFQK  120
DTGATKDCGY GGSSFGQRQS TLGEMTLEEF LFKAGVVREE MVPNSVGFAS SVAQLNSMGF  180
QEPGKQITDN NSAAFPGASN SMLSVGATRS SQQQPLQHHQ QLQLHQPLFP KQTTLTFASP  240
MQLQNNAQQA RSGARRPALG MPSPPHNTNP VQGELIQGSA NSMAGLRQNG AAGGGGGSPG  300
IPLSSDVALN SNLGMSSLSP TPYAFNEGGR GRRACNSIEK VVERRRRRMI KNRESAARSR  360
ARKQAYTIEL EAEVEKLKEI NQELMKKQAE FLEKRKNQMR EKMFVPWESK PRCLKRTLTG  420
PCQSLIRLGG LDNVLHV

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_019165276.1	0.0	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 4
Refseq	XP_019165277.1	0.0	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 4
TrEMBL	A0A1S4BC42	1e-166	A0A1S4BC42_TOBAC; ABSCISIC ACID-INSENSITIVE 5-like protein 7
STRING	XP_009791697.1	1e-161	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA776	24	97

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G49720.1	3e-88	abscisic acid responsive element-binding factor 1