PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Itr_sc000145.1_g00043.1
Organism
Ipomoea trifida
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family bZIP
Protein Properties Length: 357aa    MW: 38956 Da    PI: 7.6201
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Itr_sc000145.1_g00043.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_147.73.3e-15255299549
                              CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                   bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49 
                              +r++r++kNRe+A rsR+RK+a++ eLe+k+  Le+eN +L+ e 
  Itr_sc000145.1_g00043.1 255 RRQKRMIKNRESAARSRARKQAYTNELENKISRLEEENARLRREK 299
                              79****************************************875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.3E-15250298No hitNo description
SMARTSM003382.0E-14251315IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.645253298IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.94E-12255309No hitNo description
CDDcd147071.77E-23255297No hitNo description
PfamPF001703.1E-12255298IPR004827Basic-leucine zipper domain
PROSITE patternPS000360258273IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009737Biological Processresponse to abscisic acid
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 357 aa     Download sequence    Send to blast
MGSEGGCGGT RMQDPKSNGL EREGSLYSLT LDEVQQQFGG LGKPLSSMNL DELLKTVCTA  60
EAASQGVQQR VDYSGAPLAS GAPLHRQSSL ELSGDLSKKT VDEVWQDIQQ GQKSSSLERK  120
ATLGEMTLED FLVQARIVAE SSQGKNDLGS VQGDDSTVNV AQQAHGALFH VPPIQQPRPP  180
QSHQQQVSAM PGFMAAHPVQ QAIPVGPNPI MDATYPGTQM TAALDPMMGT LSDTQTLGRK  240
RVAPDNVVIE KSVERRQKRM IKNRESAARS RARKQAYTNE LENKISRLEE ENARLRREKN  300
IYSLLIVVLN AMYPGIANLR VSPVLDGKSS EEIEKAMPTV PPPEPKYQLR RTSSAPF
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00409DAPTransfer from AT3G56850Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019186958.10.0PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X2
TrEMBLA0A2G3BGU01e-125A0A2G3BGU0_CAPCH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
STRINGSolyc10g081350.1.11e-116(Solanum lycopersicum)
STRINGXP_009614068.11e-116(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA33342448
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56850.11e-72ABA-responsive element binding protein 3