PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Itr_sc000271.1_g00075.1

Organism

Ipomoea trifida

Taxonomic ID

35884

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

bZIP

Protein Properties

Length: 292aa MW: 32409.5 Da PI: 6.3978

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Itr_sc000271.1_g00075.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	24.2	7.2e-08	186	224	18	56
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 18 rrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 +rsR RK+++i+eLe+ v++L++ +++L+ ++ +l ++ Itr_sc000271.1_g00075.1 186 QRSRVRKLQYIAELERTVDTLQTLRSDLAAKVASLLQQH 224 79**************************99988776654 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
CDD	cd14703	2.72E-15	181	225	No hit	No description
Gene3D	G3DSA:1.20.5.170	3.0E-5	186	223	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 292 aa Download sequence Send to blast
MSRQAHLPPR CPLQKKTIAC PNQGPISPTL HKDNRFRPQH HKSASQSLII DEQPAWLEEL 60 LCESESNGCG VLHRRSASDS LTLLDGILPL PNLNKLDEAE ESGGGCGESD DCLYGPNSPR 120 GKSKVTFPDN AIVSALSEYV SQNAMQCSDW SLSFPETAQQ DPAGDTSGST GENNMEAKPV 180 KRHPGQRSRV RKLQYIAELE RTVDTLQTLR SDLAAKVASL LQQHIALSLE NSELKQKLIQ 240 IQQEKLLVDA QYCSLRNELE RQVTAPKLQD KFRARGAETS WQMLDFGKLD LN

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_019191990.1	0.0	PREDICTED: basic leucine zipper 6
TrEMBL	A0A328CVS3	1e-144	A0A328CVS3_9ASTE; Uncharacterized protein
STRING	XP_009601775.1	1e-120	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA11817	4	4

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G58120.1	1e-12	bZIP family protein