PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Itr_sc000489.1_g00017.1

Organism

Ipomoea trifida

Taxonomic ID

35884

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

BES1

Protein Properties

Length: 164aa MW: 18386.8 Da PI: 9.2644

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Itr_sc000489.1_g00017.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	123.9	2.1e-38	35	112	3	80
DUF822 3 sgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeae 80 + r p+++Er nnk+RER+RRa+a ki+aGLRa+Gny+lpk+aD n+ l A creAGw ve+DGt +++ ++e++ Itr_sc000489.1_g00017.1 35 KYRYPSERERQNNKQRERKRRAVAKKIFAGLRAHGNYQLPKHADSNDLLIAVCREAGWQVEEDGTIFKRVPVVQKETK 112 6799***************************************************************95433332222 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	5.3E-35	36	117	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Sequence ? help Back to Top
Protein Sequence Length: 164 aa Download sequence Send to blast
MIGESGSKAL RGCIKTTRGP WTVHRTTKNG GVITKYRYPS ERERQNNKQR ERKRRAVAKK 60 IFAGLRAHGN YQLPKHADSN DLLIAVCREA GWQVEEDGTI FKRVPVVQKE TKACEEDEDY 120 CKCEGGGTSS DALEALNHNL KSITTPTAMS SHVEYCDVHL ALKI

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5zd4_A	5e-14	37	103	372	438	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B	5e-14	37	103	372	438	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C	5e-14	37	103	372	438	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D	5e-14	37	103	372	438	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
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Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009795965.1	3e-54	PREDICTED: uncharacterized protein LOC104242587
TrEMBL	A0A2G2YL37	4e-55	A0A2G2YL37_CAPAN; Uncharacterized protein
STRING	XP_009795965.1	1e-53	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA6204	21	30

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19350.6	2e-17	BES1 family protein