PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Itr_sc000694.1_g00001.1
Organism
Ipomoea trifida
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family bZIP
Protein Properties Length: 532aa    MW: 59691.2 Da    PI: 8.8183
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Itr_sc000694.1_g00001.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_130.95.9e-10280311132
                              XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHH CS
                   bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLe 32 
                              e++lkre+rkq NRe+ArrsR+RK+  i+++ 
  Itr_sc000694.1_g00001.1 280 ERQLKREKRKQANRESARRSRLRKQSTIKNYS 311
                              799*************************9985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS512575125No hitNo description
PfamPF077771.4E-8119168IPR012900G-box binding protein, multifunctional mosaic region
Gene3DG3DSA:1.20.5.1701.8E-7277304No hitNo description
PfamPF001705.9E-7280309IPR004827Basic-leucine zipper domain
CDDcd147021.05E-9285304No hitNo description
PROSITE patternPS000360287302IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.8E-7356390No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 532 aa     Download sequence    Send to blast
MGKDEENNSP KCDLGSQPAQ VSSSCCWQEM PKVQFKGSPL VVKSLSLYQC GGRIPEVAAN  60
LTWVSIIKKY VLAQRLTTCL ALFKTGWRGK SMSVISEKLF IYTSGRCNSL PDIIQQFPVP  120
SSYLSTSLPT GHVPQIHMWP SQQPFMPPYG MPYPMIYPQG IVYAHPAVSL AAVTSSVELV  180
PKPSEAIDQN SAKRLKGHNG LAVPITNDNF EVNAEGSVHG TSQSDDVATS TDESNEGMED  240
PKTVEQPSLN RTPEISFARN AVRFPIEVSV QVKYLLLQDE RQLKREKRKQ ANRESARRSR  300
LRKQSTIKNY SYTTENNLGS PHSPLSWAVS RSVDIFYYNH VPNRQLTTQH PNLLEAEYEE  360
VVRKYESLNK DNTNLKSEMN KLKEDMEKLR LENATLMEKL ESTQPRQPGE ADPNDPNVKL  420
EDSCNKKSVF PRQTPAIQTC YYATDLVMAS LNVRWKGNSM VFALLGSLSV SFKNLGLKLL  480
DLKILASAFY DFLVCIFISS FQPGIKSLEG KVFSFPKLKT DAPSLVNYIH MT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1296302RRSRLRK
2296303RRSRLRKQ
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019150913.11e-158PREDICTED: G-box-binding factor 3-like isoform X1
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1889723
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46270.23e-22G-box binding factor 3