PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Itr_sc000833.1_g00003.1
Organism
Ipomoea trifida
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family bZIP
Protein Properties Length: 753aa    MW: 81173.8 Da    PI: 6.4333
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Itr_sc000833.1_g00003.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1353.1e-11275336162
                              XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                   bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 
                              e+e k+  r+ +NRe+A+ sRqRKk ++eeLe kv ++ +  ++L  +++    e a l+++
  Itr_sc000833.1_g00003.1 275 EEEEKKNARLLRNRESAQLSRQRKKHYVEELEGKVRSMHSTIQELNAKISYVMAENAGLRQQ 336
                              68899****************************************99999988888888776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF001709.7E-10275336IPR004827Basic-leucine zipper domain
SMARTSM003381.1E-15275339IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.002277337IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1704.0E-15279337No hitNo description
SuperFamilySSF579598.44E-12279337No hitNo description
CDDcd147047.30E-21280331No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 753 aa     Download sequence    Send to blast
MANSVVADPS APPPSNAAAI GFGTTSSMDD FGEPLPFPPM DPDYFSQIEG TLIDDLDFDF  60
SFDDFDLPAD VDSFLDPNFL PGSVDQHDAA QVDPACYLQA ELRNHSPELN SSGSRVLNSD  120
LFESHPIDGD LSGNLNTLSP ESNGCNLDSQ ESGSGNRGSS HARVLSCPSP ESQSSGNCGS  180
NVSAAPNSLS KGSNQSVNSS PGFEGNSIKI DLVDHNFKLE GTNNNIYNYS NSVLKRKKED  240
GESNNVKLRM SKCRKSIDIS NTENTNSNTS NVISEEEEKK NARLLRNRES AQLSRQRKKH  300
YVEELEGKVR SMHSTIQELN AKISYVMAEN AGLRQQMAGS GVGMAPSVPP PPGMYPPVMY  360
PWMPYTPPYM VRPQGSQVPL VPIPKLKPKQ AVSVSKTSKK VEGKKKVAKN KKLASVTFLG  420
LLFFIFMFGG LLPMVNVRFG GTREAFTGGN YAGNGFYEKH HGMVLAGNGT SNSVDFGHGK  480
HFSDGLHYGK KDHSGGEEPS IDHGENVCSG NGSEPLAASL YVPRNDKLVK IDGNLIIHSV  540
LASEKAMASR GGAETKSSEE TSLAIPGDLT PAKRHPHVYQ GPTEHPVALA PGTIDRDNKR  600
LTGADGRLQQ WFQEGLAGPM LSSGMCTEVF QFDISSAIIP ATSTRNVSME SSQNATNSYR  660
GKNRRILHSP IPISASSQNM SEENVGRNGH TKNNTVSPMV VSVLVDPREM GDADGESVMG  720
TKSLSRIFVV VLIDSVKYVT YSCMLPFKGS VLL
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019187450.10.0PREDICTED: bZIP transcription factor 17-like isoform X1
TrEMBLA0A484KP620.0A0A484KP62_9ASTE; Uncharacterized protein
STRINGXP_009610632.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA30292450
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40950.17e-84bZIP family protein