PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Itr_sc000937.1_g00008.1

Organism

Ipomoea trifida

Taxonomic ID

35884

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

bZIP

Protein Properties

Length: 175aa MW: 19631.3 Da PI: 9.7249

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Itr_sc000937.1_g00008.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	29.2	2e-09	58	103	6	51
HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 6 rerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkelee 51 + rr+ NReA r++R++Kka ++ Lee+v +L a N+++ k++e+ Itr_sc000937.1_g00008.1 58 ARRRASGNREAVRKYREKKKAHTAYLEEEVRKLRAVNEQMVKKVER 103 4456666**********************************99986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	5.8E-9	52	120	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	1.3E-12	54	121	No hit	No description
PROSITE profile	PS50217	9.105	55	121	IPR004827	Basic-leucine zipper domain
Pfam	PF07716	2.7E-11	57	102	IPR004827	Basic-leucine zipper domain
CDD	cd14686	7.87E-9	58	111	No hit	No description
SuperFamily	SSF57959	7.5E-7	59	103	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 175 aa Download sequence Send to blast
MEVSDHFLVL NSADSSSNVL QVQASLLSVG SVVDEKLRRN NAQTCTHIYP SLQSDGEARR 60 RASGNREAVR KYREKKKAHT AYLEEEVRKL RAVNEQMVKK VERQVVLEAE VMRLRGLLLK 120 LRDKIIDSEP GSGFPFQKHC NSATLFKQGD CAGVQSSGKG PGKMRLHCET DLNYS

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_019154676.1	3e-71	PREDICTED: basic leucine zipper 23-like
Refseq	XP_019154684.1	3e-71	PREDICTED: basic leucine zipper 23-like
TrEMBL	A0A2R6RA62	2e-45	A0A2R6RA62_ACTCH; Basic leucine zipper like
STRING	EOY17552	9e-40	(Theobroma cacao)
STRING	POPTR_0003s20320.1	9e-40	(Populus trichocarpa)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G51960.1	6e-21	basic leucine zipper 24