PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Itr_sc000946.1_g00005.1
Organism
Ipomoea trifida
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family bZIP
Protein Properties Length: 145aa    MW: 16309.6 Da    PI: 10.4267
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Itr_sc000946.1_g00005.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1482.7e-152582562
                             CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                   bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62
                             k+ +r+++NRe+ArrsR +K+++++eL+e+v  L+a N+    ++ee++k+++ + +e
  Itr_sc000946.1_g00005.1 25 KKRKRMISNRESARRSRMKKQKRVQELTEEVGRLQAANSGIVGRIEEMSKKYEVMATE 82
                             899***********************************************99987766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003385.2E-162185IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.5E-122379No hitNo description
PROSITE profilePS5021710.8182386IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.22E-102579No hitNo description
PfamPF001701.8E-132582IPR004827Basic-leucine zipper domain
CDDcd147021.56E-152676No hitNo description
PROSITE patternPS0003602843IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 145 aa     Download sequence    Send to blast
MSGIRQSWSS SGSENDQRYA GVDEKKRKRM ISNRESARRS RMKKQKRVQE LTEEVGRLQA  60
ANSGIVGRIE EMSKKYEVMA TEKSVLRAQE AELSERLKYL NDVMKNSGVG DSDNAVAAAA  120
DPLMNPWQIL FPKLPIPASS GLFKF
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019168656.12e-86PREDICTED: bZIP transcription factor 53-like
TrEMBLA0A1U8DUU81e-53A0A1U8DUU8_CAPAN; Uncharacterized protein
TrEMBLA0A2G2V5P31e-53A0A2G2V5P3_CAPBA; Uncharacterized protein
TrEMBLA0A2G2XZX41e-53A0A2G2XZX4_CAPAN; bZIP transcription factor 53-like
TrEMBLA0A2G3AWU01e-53A0A2G3AWU0_CAPCH; Uncharacterized protein
STRINGXP_009801775.12e-50(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA111261525
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G62420.13e-33basic region/leucine zipper motif 53