PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Itr_sc006808.1_g00001.1
Organism
Ipomoea trifida
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 189aa    MW: 20717.2 Da    PI: 10.3005
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Itr_sc006808.1_g00001.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.33e-1685131454
                      AP2   4 kGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkle 54 
                              +GVr ++ +g+W AeIrdp    +r+r++lg+f++ eeA +a++  ++++e
  Itr_sc006808.1_g00001.1  85 PGVRKRP-WGKWCAEIRDPQ---VRRRVWLGTFDSQEEASRAYVSKKQEFE 131
                              7******.**********93...35*******************9998876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.09E-1882123No hitNo description
SuperFamilySSF541717.19E-1483129IPR016177DNA-binding domain
PROSITE profilePS5103217.16183143IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.3E-1883125IPR001471AP2/ERF domain
SMARTSM003803.5E-1383147IPR001471AP2/ERF domain
PRINTSPR003679.4E-98495IPR001471AP2/ERF domain
PfamPF008473.3E-1085131IPR001471AP2/ERF domain
PRINTSPR003679.4E-9106122IPR001471AP2/ERF domain
PROSITE profilePS510329.045149189IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    Send to blast
MVEGETRGLR KVTIRVSDPD PYATESSSDE SDRETRPKGV VGEVFIPKSA AVAAPLTRPA  60
KDGSENVPGQ EIGSDSGSGQ AKKWPGVRKR PWGKWCAEIR DPQVRRRVWL GTFDSQEEAS  120
RAYVSKKQEF EEIARAKQGT KSKTAASILP VGVRVSKKTG KFYSELPNPT AGNRKNRLGP  180
FETAEEASQ
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019164614.11e-99PREDICTED: ethylene-responsive transcription factor ERF073-like
TrEMBLA0A484LQG21e-29A0A484LQG2_9ASTE; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.25e-20ERF family protein