PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Jcr4S00104.30
Organism
Jatropha curcas
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha
Family NAC
Protein Properties Length: 367aa    MW: 42037.4 Da    PI: 4.3558
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Jcr4S00104.30genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM661.1e-2011511128
            NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykv.ePwdLpk....kvkaeekewyfFskrdkkyatgkrknra............t 78 
                    + pGfrF+Ptdeel  +yL kk++gk + ++e+ ++++++y   ePw+  k    + +++ k++yfF++ +kk++++k+k+              t
  Jcr4S00104.30   1 MLPGFRFDPTDEELAGHYLYKKLTGKLFAAAEMiVSDCQLYGReEPWEVWKrfggEERTDVKDLYFFTELKKKASQKKNKQTLitdysrvdrsvgT 96 
                    579************************888787689999997659****862343333355588*****999988765444436788888888999 PP

            NAM  79 ksgyWkat..gkdkevlsk.....kgelvglkktLvfykgrapkgektdWvmheyrl 128
                     +g W+    gk  ev+++     + +   +kk + +   ++++++++ W++ ey+l
  Jcr4S00104.30  97 GEGNWHREdsGKIFEVTARadfdcRIKIEATKKRFKYK--NRNSSHHCGWILFEYSL 151
                    9*****76114555555556666555558999999997..4445579********97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100521.9191166IPR003441NAC domain
SuperFamilySSF1019411.96E-152164IPR003441NAC domain
PfamPF023651.2E-153151IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 367 aa     Download sequence    Send to blast
MLPGFRFDPT DEELAGHYLY KKLTGKLFAA AEMIVSDCQL YGREEPWEVW KRFGGEERTD  60
VKDLYFFTEL KKKASQKKNK QTLITDYSRV DRSVGTGEGN WHREDSGKIF EVTARADFDC  120
RIKIEATKKR FKYKNRNSSH HCGWILFEYS LPDLNRELVL CCLRKNGSKT GEKNKGKRKI  180
DDCEGGEVVN CEMVITGNKR IKANDNEAES YYNQIRANGD DDCLVIASDF DDQMGTEFWA  240
NNQVEEQQEV TSDCSIMRAN GDYGNWVIGS DFDYPLGTEL RANNQVHELE HVVSECNDIW  300
APGEDECLTI GADRDEPMGS EFSVEELLDN ANTFEFDQID YADENEDFFA YMQKFLGSDS  360
DPDSGSV
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012069059.11e-137NAC domain-containing protein 53-like, partial
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF55724133
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04070.22e-09NAC domain containing protein 47