PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Jcr4S00606.50
Common NameJCGZ_18491, LOC105641550
Organism
Jatropha curcas
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha
Family SAP
Protein Properties Length: 83aa    MW: 8587.42 Da    PI: 5.7706
Description SAP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Jcr4S00606.50genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SAP101.51e-31179179
            SAP  1 mssssssssseseegsegge.ggdassgesegpsssrqraanevwpePflealatqvaidasrslGrlaaasalanvfqv 79
                   mssssss++ + ++gs ++  +g + +ge+egps++r+ra+nevwpePf+eala+qvaidasr+lGrlaaa+alanvfqv
  Jcr4S00606.50  1 MSSSSSSEDGN-GNGSGRHYgAGSSRAGEYEGPSRTRPRAINEVWPEPFVEALAAQVAIDASRILGRLAAAQALANVFQV 79
                   77777766654.4443333303344559***************************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 83 aa     Download sequence    Send to blast
MSSSSSSEDG NGNGSGRHYG AGSSRAGEYE GPSRTRPRAI NEVWPEPFVE ALAAQVAIDA  60
SRILGRLAAA QALANVFQVP VVS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012081526.13e-46transcriptional regulator STERILE APETALA
TrEMBLA0A067K1B36e-45A0A067K1B3_JATCU; Uncharacterized protein
STRINGcassava4.1_024963m7e-25(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF76873146
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G35770.12e-11SAP family protein
Publications ? help Back to Top
  1. Zhang L, et al.
    Global analysis of gene expression profiles in physic nut (Jatropha curcas L.) seedlings exposed to salt stress.
    PLoS ONE, 2014. 9(5): p. e97878
    [PMID:24837971]