PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Jcr4S01764.20
Common NameJCGZ_06567, LOC105629427
Organism
Jatropha curcas
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha
Family NAC
Protein Properties Length: 46aa    MW: 5146.99 Da    PI: 4.4811
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Jcr4S01764.20genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM31.84.1e-101842125
            NAM  1 lppGfrFhPtdeelvveyLkkkveg 25
                   lp GfrF+Ptdeelv +yLk+k+e+
  Jcr4S01764.20 18 LPCGFRFDPTDEELVFYYLKAKLEK 42
                   699*******************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.7E-91341IPR003441NAC domain
PROSITE profilePS5100513.4751846IPR003441NAC domain
PfamPF023656.4E-71941IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 46 aa     Download sequence    Send to blast
MAARSLILPS GLAEATELPC GFRFDPTDEE LVFYYLKAKL EKTLTP
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKC7753638e-70KC775363.1 Jatropha curcas NAC transcription factor 085 gene, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012066410.14e-24NAC domain-containing protein 37
TrEMBLR4NEY01e-22R4NEY0_JATCU; NAC transcription factor 085
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10480.33e-08NAC domain containing protein 50
Publications ? help Back to Top
  1. Zhang L, et al.
    Global analysis of gene expression profiles in physic nut (Jatropha curcas L.) seedlings exposed to salt stress.
    PLoS ONE, 2014. 9(5): p. e97878
    [PMID:24837971]
  2. Wu Z, et al.
    Genome-Wide Analysis of the NAC Gene Family in Physic Nut (Jatropha curcas L.).
    PLoS ONE, 2015. 10(6): p. e0131890
    [PMID:26125188]