PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Jcr4S02412.10
Common NameJCGZ_09440, LOC105636572, WRKY15
Organism
Jatropha curcas
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha
Family WRKY
Protein Properties Length: 193aa    MW: 21247.9 Da    PI: 9.6172
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Jcr4S02412.10genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY29.71.3e-09172192121
                    ---SS-EEEEEEE--TT-SS- CS
           WRKY   1 ldDgynWrKYGqKevkgsefp 21 
                    ldDgy+WrKYGqK+vk++ +p
  Jcr4S02412.10 172 LDDGYKWRKYGQKVVKNTLHP 192
                    59**************99877 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.805.3E-11157192IPR003657WRKY domain
SuperFamilySSF1182909.81E-9164192IPR003657WRKY domain
PROSITE profilePS5081112.381167193IPR003657WRKY domain
PfamPF031064.8E-6173192IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    Send to blast
MAATSQSMLN QSGLFEEQEM PTQMGFFSFP QNLTFAQMGN CHQSLKAAGG LISVTPHHSH  60
NSVSGSTDAP SSTTTTNLTE ALLFSAAATA ANKQRDDLTS NFGGPHLLSL QRSSANLWAW  120
GEVNECLSNK RNGGDNEHHL GISAMKMKKI KARRKVREPR FCFKTMSDID VLDDGYKWRK  180
YGQKVVKNTL HPS
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKC4852670.0KC485267.1 Jatropha curcas WRKY transcription factor 15 (WRKY15) gene, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012075270.11e-143probable WRKY transcription factor 13
SwissprotQ9SVB76e-27WRK13_ARATH; Probable WRKY transcription factor 13
TrEMBLS5CK931e-142S5CK93_JATCU; WRKY transcription factor 15
STRINGcassava4.1_015466m3e-92(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF40793361
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44745.19e-20WRKY family protein
Publications ? help Back to Top
  1. Xiong W, et al.
    Genome-wide analysis of the WRKY gene family in physic nut (Jatropha curcas L.).
    Gene, 2013. 524(2): p. 124-32
    [PMID:23644253]
  2. Zhang L, et al.
    Global analysis of gene expression profiles in physic nut (Jatropha curcas L.) seedlings exposed to salt stress.
    PLoS ONE, 2014. 9(5): p. e97878
    [PMID:24837971]