PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Jcr4S02979.30
Common NameJCGZ_11068
Organism
Jatropha curcas
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha
Family NAC
Protein Properties Length: 172aa    MW: 19790.8 Da    PI: 4.2527
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Jcr4S02979.30genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM331.7e-1058843128
            NAM  43 ePwdLpkkvkaeekewyfFskrdkkya.tgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     Pw +    k+ ++  y F+k +k ++ +g+  +r++  g W  +   + v +++g+ +g+kk+Lvf  ++ ++ e+ +Wv++ey++
  Jcr4S02979.30   5 SPWMIFD--KNLKETFYAFTKLKKITTkNGSVIKRTAGIGNWDCQNI-EIVENREGRSIGVKKSLVFQVEEGESEENGHWVIDEYSV 88 
                    5777741..2223456888887776652688999999******8876.4555569999**********88999999*********86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100515.4911102IPR003441NAC domain
SuperFamilySSF1019413.27E-125102IPR003441NAC domain
PfamPF023652.2E-5688IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 172 aa     Download sequence    Send to blast
METKSPWMIF DKNLKETFYA FTKLKKITTK NGSVIKRTAG IGNWDCQNIE IVENREGRSI  60
GVKKSLVFQV EEGESEENGH WVIDEYSVHP EDEYVICRIR NKDMDEENLI KKRILAMEEN  120
DQQAPKRFRV SDLISLSDQE DVIQGEESSP ADEETTDSDE YTDEGSADSS KD
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKC7753550.0KC775355.1 Jatropha curcas NAC transcription factor 077 gene, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012075982.11e-119NAC domain-containing protein 19 isoform X1
TrEMBLR4N7S71e-118R4N7S7_JATCU; NAC transcription factor 077
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1653238
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15500.13e-11NAC domain containing protein 3
Publications ? help Back to Top
  1. Zhang L, et al.
    Global analysis of gene expression profiles in physic nut (Jatropha curcas L.) seedlings exposed to salt stress.
    PLoS ONE, 2014. 9(5): p. e97878
    [PMID:24837971]
  2. Wu Z, et al.
    Genome-Wide Analysis of the NAC Gene Family in Physic Nut (Jatropha curcas L.).
    PLoS ONE, 2015. 10(6): p. e0131890
    [PMID:26125188]