PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Jcr4S03681.20
Common NameJCGZ_25336
Organism
Jatropha curcas
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha
Family NAC
Protein Properties Length: 307aa    MW: 35368.1 Da    PI: 6.6873
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Jcr4S03681.20genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM149.61.6e-46111373128
            NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..k 96 
                    pGfrFhPt+eel+++yLk+ + gkkl + +vi  ++iy+++Pw+Lp  ++++e+ewyfF++rd+++ +g r+nr+t +g+Wkatg+d++++s    
  Jcr4S03681.20  11 PGFRFHPTEEELLDFYLKNMIFGKKLCF-DVIGYLNIYHHDPWELPGLARNGEREWYFFVPRDRRHGSGGRPNRTTVNGFWKATGSDRKIVSLsdP 105
                    9************************988.99***************8888999*************************************997666 PP

            NAM  97 gelvglkktLvfykgrapkgektdWvmheyrl 128
                    ++ +gl+ktLvfykgrap+g+ktdWvm+eyrl
  Jcr4S03681.20 106 KRIIGLRKTLVFYKGRAPRGSKTDWVMNEYRL 137
                    778***************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100553.8239155IPR003441NAC domain
SuperFamilySSF1019411.02E-5510155IPR003441NAC domain
PfamPF023651.2E-2411137IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009965Biological Processleaf morphogenesis
GO:0010200Biological Processresponse to chitin
GO:0045792Biological Processnegative regulation of cell size
GO:0048281Biological Processinflorescence morphogenesis
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    Send to blast
MEEMASEMDL PGFRFHPTEE ELLDFYLKNM IFGKKLCFDV IGYLNIYHHD PWELPGLARN  60
GEREWYFFVP RDRRHGSGGR PNRTTVNGFW KATGSDRKIV SLSDPKRIIG LRKTLVFYKG  120
RAPRGSKTDW VMNEYRLPDS CPSPKDIVLC KIYRKATSLK VLEQRAAMEE EIKTTINTSS  180
SSSSPLSSLD MDTMSFYSQQ EDPISMQLLV FKKEEGEHVV MVEDRKISDN DNYNNDKNNR  240
DEKPNKEIKG SSSSSSSLQL PMGKDKLPEL EVPKLGIDWS QDNFLFNSPW LQSLAQNLTP  300
YANILNF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A3e-45615511168Stress-induced transcription factor NAC1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269|PubMed:26834774}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269|PubMed:26834774}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKC7753110.0KC775311.1 Jatropha curcas NAC transcription factor 033 gene, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012087679.10.0NAC domain-containing protein 35
SwissprotQ10S651e-97NAC22_ORYSJ; NAC domain-containing protein 22
TrEMBLR4NFU50.0R4NFU5_JATCU; NAC transcription factor 033
STRINGXP_002525740.11e-164(Ricinus communis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF62143251
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17040.11e-110NAC domain containing protein 36
Publications ? help Back to Top
  1. Zhang L, et al.
    Global analysis of gene expression profiles in physic nut (Jatropha curcas L.) seedlings exposed to salt stress.
    PLoS ONE, 2014. 9(5): p. e97878
    [PMID:24837971]
  2. Wu Z, et al.
    Genome-Wide Analysis of the NAC Gene Family in Physic Nut (Jatropha curcas L.).
    PLoS ONE, 2015. 10(6): p. e0131890
    [PMID:26125188]
  3. Hong Y,Zhang H,Huang L,Li D,Song F
    Overexpression of a Stress-Responsive NAC Transcription Factor Gene ONAC022 Improves Drought and Salt Tolerance in Rice.
    Front Plant Sci, 2016. 7: p. 4
    [PMID:26834774]