PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Jcr4S04480.30

Organism

Jatropha curcas

Taxonomic ID

180498

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha

Family

bZIP

Protein Properties

Length: 177aa MW: 19628.9 Da PI: 8.5085

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Jcr4S04480.30	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	22.6	2.4e-07	129	156	26	53
HHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 26 aeieeLeekvkeLeaeNkaLkkeleelk 53 a++++Le+ vkeLe+eN +L+++leel Jcr4S04480.30 129 AYTQQLENTVKELEQENARLRSQLEELY 156 89**********************9996 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	2.6E-5	129	155	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 177 aa Download sequence Send to blast
MLSSTADRES TRNRLNRLSS SSSSSTSSSS SPSPFCHNTQ KAKTMEEVWK DINLASLHDN 60 HSSDPNPNFI LQDFFARPFN KDPPKRLVST TTKNAAVTAA APATVLSLNS IPVGFDFLEN 120 SDPLIIRPAY TQQLENTVKE LEQENARLRS QLEELYLAAA AQLPKKHMLH RTSTAPF

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020540142.1	7e-67	protein FD
TrEMBL	A0A067JJ22	4e-66	A0A067JJ22_JATCU; Uncharacterized protein
STRING	cassava4.1_021397m	4e-35	(Manihot esculenta)
STRING	XP_002531142.1	7e-35	(Ricinus communis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF3755	32	52

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35900.1	1e-10	bZIP family protein