PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Jcr4S04497.20

Common Name

JCGZ_09225

Organism

Jatropha curcas

Taxonomic ID

180498

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha

Family

BES1

Protein Properties

Length: 218aa MW: 23143.7 Da PI: 8.6028

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Jcr4S04497.20	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	115.9	5.9e-36	4	102	3	96
DUF822 3 sgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyr.kgskpl....eeaeaagssasaspess 93 s ++++ E+E++k+RER+RRai++ki+ GLR++G+y+l raD+neVl+ L++eAGw+ve+DGtt+r k ++ ++ + +s++++p+ss Jcr4S04497.20 4 SSSTRSESEKEKTKLRERQRRAITTKIFHGLRRHGGYHLSPRADINEVLRELAKEAGWIVEPDGTTHRcKLLNRCptcgATPFQNYTSTTTTPTSS 99 66778899************************************************************5222222223333444445555555555 PP DUF822 94 lqs 96 ++ Jcr4S04497.20 100 STV 102 443 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	1.6E-32	5	138	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated

Sequence ? help Back to Top
Protein Sequence Length: 218 aa Download sequence Send to blast
MVGSSSTRSE SEKEKTKLRE RQRRAITTKI FHGLRRHGGY HLSPRADINE VLRELAKEAG 60 WIVEPDGTTH RCKLLNRCPT CGATPFQNYT STTTTPTSSS TVIVGGSGAG GVTGGECSTT 120 TSPRQFDPTT MIVNSNNNNG ELTTTTATSS PYICSDGASG CEVEIPLAFY MYRGIGGATV 180 AGGGMKVAVP GHQQPQQQEA RTSNQNTPVG SPLHHSSN

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012075632.1	1e-161	protein BZR1 homolog 3
TrEMBL	A0A067KFN1	1e-159	A0A067KFN1_JATCU; Uncharacterized protein
STRING	cassava4.1_033592m	1e-81	(Manihot esculenta)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF13979	16	22

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45880.1	4e-16	beta-amylase 7

Publications ? help Back to Top
Zhang L, et al. Global analysis of gene expression profiles in physic nut (Jatropha curcas L.) seedlings exposed to salt stress. PLoS ONE, 2014. 9(5): p. e97878 [PMID:24837971]