PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Jcr4S06414.10
Organism
Jatropha curcas
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha
Family GATA
Protein Properties Length: 210aa    MW: 22925 Da    PI: 10.2866
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Jcr4S06414.10genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA54.91.2e-17161196134
           GATA   1 Cs..nCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                    C+  nC+t +Tp+WR+gp g+k+LCnaCG++y+k++
  Jcr4S06414.10 161 CTnyNCNTNDTPMWRKGPLGPKSLCNACGIKYQKEE 196
                    55559****************************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF577162.28E-11156201No hitNo description
SMARTSM004011.1E-11157209IPR000679Zinc finger, GATA-type
Gene3DG3DSA:3.30.50.103.8E-13160200IPR013088Zinc finger, NHR/GATA-type
PfamPF003201.6E-15161196IPR000679Zinc finger, GATA-type
CDDcd002021.98E-8165194No hitNo description
PROSITE profilePS5011410.91165199IPR000679Zinc finger, GATA-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    Send to blast
ATNNYGIGGG RAATNNYGIG GGQAAINHYG MINRMGNVGM GNIGSNLLGG QNLNSWAYDM  60
GSSSTDGILR HHQQYATGIP AYQNINGGLT LPPFQPHSLT SYTLLDCSPF KARQTGKXXX  120
XXXXXXXXXX XXXXXXXXXX XXXXVARRPR NGNNINPHRR CTNYNCNTND TPMWRKGPLG  180
PKSLCNACGI KYQKEEGKRK AKEAAKDSKA
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012093241.11e-124GATA zinc finger domain-containing protein 7
RefseqXP_012093243.11e-124GATA zinc finger domain-containing protein 7
TrEMBLA0A067LB101e-122A0A067LB10_JATCU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF137781622
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20750.15e-15GATA transcription factor 29