PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Jcr4S06761.40
Organism
Jatropha curcas
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha
Family GeBP
Protein Properties Length: 254aa    MW: 29198.5 Da    PI: 7.5013
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Jcr4S06761.40genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57362.11.4e-1969161298
         DUF573   2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksis.fkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiW 96 
                    +++rlw++eDe vlL ++i+   k g   s+++d++y+ v k ++  +vsksql+eK+ rL+kK+kk+  +   g   s+s +h+ + f+l++++W
  Jcr4S06761.40  69 QSNRLWNNEDETVLLSAMINLGIKSG--DSNNVDRLYDHVIKDLHcTTVSKSQLTEKVHRLRKKYKKNLVR---GGRDSLSGKHEIELFDLCHQLW 159
                    689******************99999..5689*****998777772579*********************9...55559***************** PP

         DUF573  97 gs 98 
                    ++
  Jcr4S06761.40 160 EK 161
                    85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045041.6E-1771160IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    Send to blast
MSTMKPASVA DYVSDSESEE NRCTMKKREA QEDMTVVLKS KKKRTRDVED DDVDYIYEEK  60
DKNNAKPKQS NRLWNNEDET VLLSAMINLG IKSGDSNNVD RLYDHVIKDL HCTTVSKSQL  120
TEKVHRLRKK YKKNLVRGGR DSLSGKHEIE LFDLCHQLWE KSSQILAITA ISAPAGGGNP  180
KPISDLFCMN CLTKMARVPA KFEWDLDDTE HLEPKDQEVL MMMKESQIAD MAALKKRLWL  240
VKTIVEEKMK SFQI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12543KKREAQEDMTVVLKSKKKR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A067LQ421e-169A0A067LQ42_JATCU; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61730.12e-10DNA-binding storekeeper protein-related transcriptional regulator