PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Jcr4S11357.10
Common NameJCGZ_06993, LOC105637450
Organism
Jatropha curcas
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha
Family bZIP
Protein Properties Length: 244aa    MW: 26569.3 Da    PI: 7.0096
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Jcr4S11357.10genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_154.13.4e-1782137459
                    XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
         bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 
                    ++r rr+ +NRe+ArrsR+RK+a +  Le  v++L++eN +L k+l+  ++++   
  Jcr4S11357.10  82 VRRIRRMVSNRESARRSRKRKQAHLHDLELQVDQLSGENASLYKQLSDTTQQYRDA 137
                    789****************************************9999998888765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003389.7E-1979143IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.18581133IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.5E-1382134No hitNo description
PfamPF001701.2E-1482134IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.3E-1383135No hitNo description
CDDcd147025.68E-2084135No hitNo description
PROSITE patternPS00036086101IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0071333Biological Processcellular response to glucose stimulus
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0042803Molecular Functionprotein homodimerization activity
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    Send to blast
MNGLTSGGVA ESVGVWSGHM SPKQSRTSST PIDAHSSVCA SANKAQDRDN QTRVLTSSGS  60
SDDEDVEIEA GPCEQSTNPT DVRRIRRMVS NRESARRSRK RKQAHLHDLE LQVDQLSGEN  120
ASLYKQLSDT TQQYRDADTN NRVLKSDVEA LRAKVKLAED MVTRGSLTCS LNQLIQNQHH  180
LTSPPPLNRH SIRAVANVSP TVTINGDHEN SYGGMALSGP ALSDANLRNS VISDAVSCVT  240
ELWH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
195101RRSRKRK
295102RRSRKRKQ
397102SRKRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. {ECO:0000250}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Repressed by glucose. {ECO:0000269|PubMed:18841482}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012076304.10.0basic leucine zipper 9
SwissprotQ9FUD33e-65BZIP9_ARATH; Basic leucine zipper 9
TrEMBLA0A067KBB01e-179A0A067KBB0_JATCU; Uncharacterized protein
STRINGcassava4.1_012780m1e-94(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF41953458
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G24800.11e-67basic leucine zipper 9
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Zhang L, et al.
    Global analysis of gene expression profiles in physic nut (Jatropha curcas L.) seedlings exposed to salt stress.
    PLoS ONE, 2014. 9(5): p. e97878
    [PMID:24837971]
  3. Ortiz-Espín A, et al.
    Mitochondrial AtTrxo1 is transcriptionally regulated by AtbZIP9 and AtAZF2 and affects seed germination under saline conditions.
    J. Exp. Bot., 2017. 68(5): p. 1025-1038
    [PMID:28184497]
  4. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  5. Pedrotti L, et al.
    Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness.
    Plant Cell, 2018. 30(2): p. 495-509
    [PMID:29348240]