PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Jcr4U29916.20
Organism
Jatropha curcas
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha
Family bZIP
Protein Properties Length: 238aa    MW: 26468.5 Da    PI: 4.5608
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Jcr4U29916.20genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_146.76.9e-15166210448
                    XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
         bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 
                     ++++r++kNRe+A rsR+RK+a + eLe  v eLe+eN++L ke
  Jcr4U29916.20 166 QQKQKRMIKNRESAARSRERKQAHTIELESLVRELEEENTRLLKE 210
                    689**************************************9876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.1E-10163221IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.726165210IPR004827Basic-leucine zipper domain
PfamPF001706.4E-13165210IPR004827Basic-leucine zipper domain
CDDcd147073.95E-20167209No hitNo description
SuperFamilySSF579591.56E-10167210No hitNo description
Gene3DG3DSA:1.20.5.1701.7E-12168210No hitNo description
PROSITE patternPS000360170185IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    Send to blast
MATTSSTNSD MPRQPSLCSS LSTLLADLQN QNQDQNQFTT TEQNPLVSTA MDDLLKNIYS  60
YPCDDHSPLP GCASKSVDEV WKEIVSGSDQ KREGNEGITL EDFLTKAGAV SEEDVKGVGV  120
PAQMEMSVGP YSVDINNHGM IMAEGGGRGR QKRRAVEEPP MDKATQQKQK RMIKNRESAA  180
RSRERKQAHT IELESLVREL EEENTRLLKE ELGPLLVKMV GEGDINFFEQ YSVQETTN
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box motif (5'-CCACGTGG-3') of the rbcS-1A gene promoter. G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control. {ECO:0000269|PubMed:8146148}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012067143.11e-156G-box-binding factor 4
SwissprotP427771e-30GBF4_ARATH; G-box-binding factor 4
TrEMBLA0A067L0U01e-154A0A067L0U0_JATCU; Uncharacterized protein
STRINGcassava4.1_033486m4e-69(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20283481
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G03970.13e-26G-box binding factor 4