PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information? help Back to Top

TF ID

KDD71214.1

Organism

Taxonomic ID

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Chlorellales

Family

Protein Properties

Length: 145aa MW: 16153.8 Da PI: 6.2753

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
KDD71214.1	genome	UBC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	22.6	2.5e-07	104	140	1	32
TSSS-HHHHHHHHHHHHHTTTT.....-HHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.....tWktIartmg 32 r++WT eE e l+ av++ G + +W++ a+++g KDD71214.1 104 RKNWTDEETEELKAAVAMQGRDggegaDWEALAARFG 140 789***************99**********999 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50090	4.437	37	84	IPR017877	Myb-like domain
Gene3D	G3DSA:1.10.10.60	8.4E-5	98	140	IPR009057	Homeodomain-like
PROSITE profile	PS50090	6.574	99	145	IPR017877	Myb-like domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 145 aa Download sequence Send to blast
MGGGGYGPGP GSMGGSHPGS HGGAPQADPN MVYKNWWDES DEKELQRLVS DPDYRRLKLG 60 SEELDWPQLE ARFRRSQNAL RKKYWMLSKA PQGVHQNPRP RAERKNWTDE ETEELKAAVA 120 MQGRDGGEGA DWEALAARFG TSVQT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	71	82	RFRRSQNALRKK

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011396353.1	5e-52	hypothetical protein F751_4362
TrEMBL	A0A059LB25	1e-101	A0A059LB25_9CHLO; Uncharacterized protein (Fragment)
STRING	A0A087SCM6	2e-51	(Auxenochlorella protothecoides)