PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information? help Back to Top

TF ID

KDD74652.1

Organism

Taxonomic ID

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Chlorellales

Family

Protein Properties

Length: 169aa MW: 18041.4 Da PI: 4.7515

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
KDD74652.1	genome	UBC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	37.6	5.4e-12	40	108	23	91
NF-YB 23 anakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyr 91 ++a++skd e + fi f+t+ a+d +++ kr ti+ dd++ al +l + + vepl+ l++ + KDD74652.1 40 KDAQLSKDVLLAFSEAARVFIHFLTATANDLAKERKRSTIAVDDVIAALNELDLAELVEPLTESLQELK 108 46788899999999************************************************9998765 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.20.10	1.7E-24	11	132	IPR009072	Histone-fold
SuperFamily	SSF47113	1.18E-19	14	132	IPR009072	Histone-fold
Pfam	PF00808	1.9E-7	41	88	IPR003958	Transcription factor CBF/NF-Y/archaeal histone domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046982	Molecular Function	protein heterodimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 169 aa Download sequence Send to blast
MATAVAADAC DGEIPKALLK RLLKAKLSSL DAARGITSVK DAQLSKDVLL AFSEAARVFI 60 HFLTATANDL AKERKRSTIA VDDVIAALNE LDLAELVEPL TESLQELKAE AALKSKRKAE 120 NAKRKADAGS PSPTPETDVE AGADGKRARA LEPDREIADA YKSAEEDEQ

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011400229.1	1e-27	SPX domain-containing protein 2
TrEMBL	A0A059LJZ8	1e-112	A0A059LJZ8_9CHLO; Uncharacterized protein
STRING	A0A087SNF8	5e-27	(Auxenochlorella protothecoides)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Chlorophytae	OGCP3453	13	13

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27470.1	6e-21	nuclear factor Y, subunit B11