PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KFK24587.1
Organism
Arabis alpina
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Arabideae; Arabis
Family GeBP
Protein Properties Length: 310aa    MW: 35670.2 Da    PI: 4.589
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KFK24587.1genomeMPIPBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57390.32.3e-2884178498
      DUF573   4 qrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWgs 98 
                 +  w+++De+ +L+G+++++++t+  + +d+dafy f+k+si ++++k+ql +Ki +LKk+f+++ +k+ + k  sf++++d ++f+ls++iWg+
  KFK24587.1  84 KISWTKNDELHILKGIVNYEDETKLRYRADWDAFYAFIKDSIVSNFTKKQLRNKISKLKKRFTDNLAKSGDSKGSSFTNSNDGEMFKLSMIIWGK 178
                 455*****************************************************************999999*******************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045046.1E-2486177IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    Send to blast
MQKFPSLITN FMGSINTDDS NIDCFEIRFN DRAVASSSHR TRKRVVVDED EVSEKETKLI  60
RKKPRTSTTT TTTTTLVTPP TLSKISWTKN DELHILKGIV NYEDETKLRY RADWDAFYAF  120
IKDSIVSNFT KKQLRNKISK LKKRFTDNLA KSGDSKGSSF TNSNDGEMFK LSMIIWGKKN  180
ETECDTNVNM DQGKDLALVE NEQNNESVEH KQMIENVEQG KEDLTNVEHA KINENVAQEE  240
DATYVEDEQI TENMAQEEGQ SNENVEQGQS NDNVEQAEDV TYVEREQINQ NVEQGRDGEE  300
ELVRRHCFRA
Cis-element ? help Back to Top
SourceLink
PlantRegMapKFK24587.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A087G3Y50.0A0A087G3Y5_ARAAL; Uncharacterized protein
STRINGA0A087G3Y60.0(Arabis alpina)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36340.13e-37DNA-binding storekeeper protein-related transcriptional regulator