PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KFK25109.1
Organism
Arabis alpina
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Arabideae; Arabis
Family bZIP
Protein Properties Length: 171aa    MW: 20041.2 Da    PI: 10.0222
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KFK25109.1genomeMPIPBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_121.35.8e-0753120363
                 XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.......HHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLea.......eNkaLkkeleelkkevaklksev 63 
                 +lk  rr ++NR++ +rsR +K+++ +  e+k++e+ea        Nk+L  +++ l++ v++lk ++
  KFK25109.1  53 DLKEVRRIISNRISVQRSRWKKLQYAKYPERKIQEIEAglsvwraRNKMLFAQNKILSEIVERLKIKN 120
                 68999****************************99985333333389999999999999999998776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1703.5E-748115No hitNo description
SMARTSM003388.5E-651115IPR004827Basic-leucine zipper domain
PfamPF077162.3E-653102IPR004827Basic-leucine zipper domain
SuperFamilySSF579597.31E-754111No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    Send to blast
MSKASLPILT SFQESNGGNQ SGESGEKKVY YFNYELEPGF TIRLRQEVDP NMDLKEVRRI  60
ISNRISVQRS RWKKLQYAKY PERKIQEIEA GLSVWRARNK MLFAQNKILS EIVERLKIKN  120
KKLEELPFAA TQRCISDQDQ VALGEVLLKL REIGDEIMAY KWDTGMRHFI L
Cis-element ? help Back to Top
SourceLink
PlantRegMapKFK25109.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A087G5F71e-122A0A087G5F7_ARAAL; Uncharacterized protein
STRINGA0A087G5F71e-123(Arabis alpina)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM144181821
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G07160.14e-22bZIP family protein